BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Eche_v2.0_cds.fasta 30,099 sequences; 37,600,338 total letters Query= Untitled_sequence Length=20 Score E Sequences producing significant alignments: (Bits) Value Erche07g009500.1.mRNA1.mrna1gene=Erche07g009500.1.mRNA1 38.1 4e-04 Erche07g009480.1.mRNA1.mrna1gene=Erche07g009480.1.mRNA1 38.1 4e-04 Erche03g032390.1.mRNA1.mrna1gene=Erche03g032390.1.mRNA1 36.2 0.001 Erche03g029150.1.mRNA1.mrna1gene=Erche03g029150.1.mRNA1 28.8 0.23 Erche03g031840.1.mRNA1.mrna1gene=Erche03g031840.1.mRNA1 28.8 0.23 Erche03g034130.1.mRNA1.mrna1gene=Erche03g034130.1.mRNA1 28.8 0.23 Erche01g035760.1.mRNA1.mrna1gene=Erche01g035760.1.mRNA1 28.8 0.23 Erche01g035780.1.mRNA1.mrna1gene=Erche01g035780.1.mRNA1 28.8 0.23 Erche01g035790.1.mRNA1.mrna1gene=Erche01g035790.1.mRNA1 28.8 0.23 Erche01g035910.1.mRNA1.mrna1gene=Erche01g035910.1.mRNA1 28.8 0.23 Erche03g009030.1.mRNA1.mrna1gene=Erche03g009030.1.mRNA1 27.0 0.84 Erche02g024880.1.mRNA1.mrna1gene=Erche02g024880.1.mRNA1 27.0 0.84 Erche02g017682.1.mRNA1.mrna1gene=Erche02g017682.1.mRNA1 27.0 0.84 Erche02g017480.1.mRNA1.mrna1gene=Erche02g017480.1.mRNA1 27.0 0.84 >Erche07g009500.1.mRNA1.mrna1 gene=Erche07g009500.1.mRNA1 Length=1488 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 CCTTAAATGGCTCGATTCTA 20 |||||||||||||||||||| Sbjct 831 CCTTAAATGGCTCGATTCTA 850 >Erche07g009480.1.mRNA1.mrna1 gene=Erche07g009480.1.mRNA1 Length=8238 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 CCTTAAATGGCTCGATTCTA 20 |||||||||||||||||||| Sbjct 750 CCTTAAATGGCTCGATTCTA 769 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 CCTTAAATGGCTCGATTCTA 20 |||||||||||||||||||| Sbjct 7617 CCTTAAATGGCTCGATTCTA 7636 Score = 32.5 bits (17), Expect = 0.018 Identities = 19/20 (95%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 CCTTAAATGGCTCGATTCTA 20 |||||||||||| ||||||| Sbjct 5181 CCTTAAATGGCTTGATTCTA 5200 Score = 30.7 bits (16), Expect = 0.065 Identities = 18/19 (95%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 2 CTTAAATGGCTCGATTCTA 20 ||||||||||| ||||||| Sbjct 2092 CTTAAATGGCTTGATTCTA 2110 Score = 30.7 bits (16), Expect = 0.065 Identities = 18/19 (95%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 2 CTTAAATGGCTCGATTCTA 20 ||||||||||| ||||||| Sbjct 3559 CTTAAATGGCTTGATTCTA 3577 >Erche03g032390.1.mRNA1.mrna1 gene=Erche03g032390.1.mRNA1 Length=2571 Score = 36.2 bits (19), Expect = 0.001 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 2 CTTAAATGGCTCGATTCTA 20 ||||||||||||||||||| Sbjct 835 CTTAAATGGCTCGATTCTA 853 >Erche03g029150.1.mRNA1.mrna1 gene=Erche03g029150.1.mRNA1 Length=2616 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 3 TTAAATGGCTCGATTCTA 20 |||||||||| ||||||| Sbjct 1199 TTAAATGGCTTGATTCTA 1216 >Erche03g031840.1.mRNA1.mrna1 gene=Erche03g031840.1.mRNA1 Length=1377 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 3 TTAAATGGCTCGATTCTA 20 |||||||||| ||||||| Sbjct 770 TTAAATGGCTTGATTCTA 787 >Erche03g034130.1.mRNA1.mrna1 gene=Erche03g034130.1.mRNA1 Length=1425 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 3 TTAAATGGCTCGATTCTA 20 |||||||||| ||||||| Sbjct 770 TTAAATGGCTTGATTCTA 787 >Erche01g035760.1.mRNA1.mrna1 gene=Erche01g035760.1.mRNA1 Length=6111 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 3 TTAAATGGCTCGATTCTA 20 |||||||||| ||||||| Sbjct 2255 TTAAATGGCTTGATTCTA 2272 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 3 TTAAATGGCTCGATTCTA 20 |||||||||| ||||||| Sbjct 3509 TTAAATGGCTTGATTCTA 3526 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 3 TTAAATGGCTCGATTCTA 20 |||||||||| ||||||| Sbjct 4781 TTAAATGGCTTGATTCTA 4798 >Erche01g035780.1.mRNA1.mrna1 gene=Erche01g035780.1.mRNA1 Length=789 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 3 TTAAATGGCTCGATTCTA 20 |||||||||| ||||||| Sbjct 311 TTAAATGGCTTGATTCTA 328 >Erche01g035790.1.mRNA1.mrna1 gene=Erche01g035790.1.mRNA1 Length=2337 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 3 TTAAATGGCTCGATTCTA 20 |||||||||| ||||||| Sbjct 1694 TTAAATGGCTTGATTCTA 1711 >Erche01g035910.1.mRNA1.mrna1 gene=Erche01g035910.1.mRNA1 Length=2535 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 3 TTAAATGGCTCGATTCTA 20 |||||||||| ||||||| Sbjct 749 TTAAATGGCTTGATTCTA 766 >Erche03g009030.1.mRNA1.mrna1 gene=Erche03g009030.1.mRNA1 Length=948 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Minus Query 5 AAATGGCTCGATTC 18 |||||||||||||| Sbjct 428 AAATGGCTCGATTC 415 >Erche02g024880.1.mRNA1.mrna1 gene=Erche02g024880.1.mRNA1 Length=1554 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Minus Query 5 AAATGGCTCGATTC 18 |||||||||||||| Sbjct 468 AAATGGCTCGATTC 455 >Erche02g017682.1.mRNA1.mrna1 gene=Erche02g017682.1.mRNA1 Length=414 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Minus Query 4 TAAATGGCTCGATT 17 |||||||||||||| Sbjct 221 TAAATGGCTCGATT 208 >Erche02g017480.1.mRNA1.mrna1 gene=Erche02g017480.1.mRNA1 Length=540 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Minus Query 4 TAAATGGCTCGATT 17 |||||||||||||| Sbjct 323 TAAATGGCTCGATT 310 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 111265965 Database: Eche_v2.0_cds.fasta Posted date: Jul 17, 2024 4:51 PM Number of letters in database: 37,600,338 Number of sequences in database: 30,099 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5