BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Eche_v2.0_cds.fasta 30,099 sequences; 37,600,338 total letters Query= Untitled_sequence Length=20 Score E Sequences producing significant alignments: (Bits) Value Erche07g009500.1.mRNA1.mrna1gene=Erche07g009500.1.mRNA1 38.1 4e-04 Erche07g009480.1.mRNA1.mrna1gene=Erche07g009480.1.mRNA1 38.1 4e-04 Erche03g029150.1.mRNA1.mrna1gene=Erche03g029150.1.mRNA1 32.5 0.018 Erche03g032390.1.mRNA1.mrna1gene=Erche03g032390.1.mRNA1 32.5 0.018 Erche01g035760.1.mRNA1.mrna1gene=Erche01g035760.1.mRNA1 32.5 0.018 Erche01g035910.1.mRNA1.mrna1gene=Erche01g035910.1.mRNA1 32.5 0.018 Erche07g029450.1.mRNA1.mrna1gene=Erche07g029450.1.mRNA1 30.7 0.065 Erche08g011650.1.mRNA1.mrna1gene=Erche08g011650.1.mRNA1 28.8 0.23 Erche02g035640.1.mRNA1.mrna1gene=Erche02g035640.1.mRNA1 28.8 0.23 Erche07g012670.1.mRNA1.mrna1gene=Erche07g012670.1.mRNA1 27.0 0.84 Erche06g026800.1.mRNA1.mrna1gene=Erche06g026800.1.mRNA1 27.0 0.84 Erche03g031840.1.mRNA1.mrna1gene=Erche03g031840.1.mRNA1 27.0 0.84 Erche03g034130.1.mRNA1.mrna1gene=Erche03g034130.1.mRNA1 27.0 0.84 Erche01g035780.1.mRNA1.mrna1gene=Erche01g035780.1.mRNA1 27.0 0.84 Erche01g035790.1.mRNA1.mrna1gene=Erche01g035790.1.mRNA1 27.0 0.84 >Erche07g009500.1.mRNA1.mrna1 gene=Erche07g009500.1.mRNA1 Length=1488 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 AGTATAAAGAGTTAGTTGAG 20 |||||||||||||||||||| Sbjct 983 AGTATAAAGAGTTAGTTGAG 1002 >Erche07g009480.1.mRNA1.mrna1 gene=Erche07g009480.1.mRNA1 Length=8238 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 AGTATAAAGAGTTAGTTGAG 20 |||||||||||||||||||| Sbjct 902 AGTATAAAGAGTTAGTTGAG 921 Score = 27.0 bits (14), Expect = 0.84 Identities = 18/20 (90%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 AGTATAAAGAGTTAGTTGAG 20 ||||||| ||||||| |||| Sbjct 7769 AGTATAACGAGTTAGCTGAG 7788 >Erche03g029150.1.mRNA1.mrna1 gene=Erche03g029150.1.mRNA1 Length=2616 Score = 32.5 bits (17), Expect = 0.018 Identities = 19/20 (95%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 AGTATAAAGAGTTAGTTGAG 20 || ||||||||||||||||| Sbjct 1349 AGAATAAAGAGTTAGTTGAG 1368 >Erche03g032390.1.mRNA1.mrna1 gene=Erche03g032390.1.mRNA1 Length=2571 Score = 32.5 bits (17), Expect = 0.018 Identities = 19/20 (95%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 AGTATAAAGAGTTAGTTGAG 20 ||||||||| |||||||||| Sbjct 986 AGTATAAAGCGTTAGTTGAG 1005 >Erche01g035760.1.mRNA1.mrna1 gene=Erche01g035760.1.mRNA1 Length=6111 Score = 32.5 bits (17), Expect = 0.018 Identities = 19/20 (95%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 AGTATAAAGAGTTAGTTGAG 20 || ||||||||||||||||| Sbjct 2405 AGAATAAAGAGTTAGTTGAG 2424 Score = 32.5 bits (17), Expect = 0.018 Identities = 19/20 (95%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 AGTATAAAGAGTTAGTTGAG 20 || ||||||||||||||||| Sbjct 4931 AGAATAAAGAGTTAGTTGAG 4950 >Erche01g035910.1.mRNA1.mrna1 gene=Erche01g035910.1.mRNA1 Length=2535 Score = 32.5 bits (17), Expect = 0.018 Identities = 19/20 (95%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 AGTATAAAGAGTTAGTTGAG 20 || ||||||||||||||||| Sbjct 872 AGAATAAAGAGTTAGTTGAG 891 >Erche07g029450.1.mRNA1.mrna1 gene=Erche07g029450.1.mRNA1 Length=1179 Score = 30.7 bits (16), Expect = 0.065 Identities = 19/20 (95%), Gaps = 1/20 (5%) Strand=Plus/Plus Query 2 GTA-TAAAGAGTTAGTTGAG 20 ||| |||||||||||||||| Sbjct 995 GTAGTAAAGAGTTAGTTGAG 1014 >Erche08g011650.1.mRNA1.mrna1 gene=Erche08g011650.1.mRNA1 Length=2151 Score = 28.8 bits (15), Expect = 0.23 Identities = 15/15 (100%), Gaps = 0/15 (0%) Strand=Plus/Plus Query 5 TAAAGAGTTAGTTGA 19 ||||||||||||||| Sbjct 1011 TAAAGAGTTAGTTGA 1025 >Erche02g035640.1.mRNA1.mrna1 gene=Erche02g035640.1.mRNA1 Length=1926 Score = 28.8 bits (15), Expect = 0.23 Identities = 15/15 (100%), Gaps = 0/15 (0%) Strand=Plus/Plus Query 6 AAAGAGTTAGTTGAG 20 ||||||||||||||| Sbjct 1504 AAAGAGTTAGTTGAG 1518 >Erche07g012670.1.mRNA1.mrna1 gene=Erche07g012670.1.mRNA1 Length=2760 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Plus Query 6 AAAGAGTTAGTTGA 19 |||||||||||||| Sbjct 1951 AAAGAGTTAGTTGA 1964 >Erche06g026800.1.mRNA1.mrna1 gene=Erche06g026800.1.mRNA1 Length=825 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Plus Query 2 GTATAAAGAGTTAG 15 |||||||||||||| Sbjct 441 GTATAAAGAGTTAG 454 >Erche03g031840.1.mRNA1.mrna1 gene=Erche03g031840.1.mRNA1 Length=1377 Score = 27.0 bits (14), Expect = 0.84 Identities = 18/20 (90%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 AGTATAAAGAGTTAGTTGAG 20 || |||| |||||||||||| Sbjct 920 AGAATAAGGAGTTAGTTGAG 939 >Erche03g034130.1.mRNA1.mrna1 gene=Erche03g034130.1.mRNA1 Length=1425 Score = 27.0 bits (14), Expect = 0.84 Identities = 16/17 (94%), Gaps = 0/17 (0%) Strand=Plus/Plus Query 4 ATAAAGAGTTAGTTGAG 20 |||| |||||||||||| Sbjct 923 ATAAGGAGTTAGTTGAG 939 >Erche01g035780.1.mRNA1.mrna1 gene=Erche01g035780.1.mRNA1 Length=789 Score = 27.0 bits (14), Expect = 0.84 Identities = 18/20 (90%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 AGTATAAAGAGTTAGTTGAG 20 || |||| |||||||||||| Sbjct 461 AGAATAACGAGTTAGTTGAG 480 >Erche01g035790.1.mRNA1.mrna1 gene=Erche01g035790.1.mRNA1 Length=2337 Score = 27.0 bits (14), Expect = 0.84 Identities = 18/20 (90%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 AGTATAAAGAGTTAGTTGAG 20 || ||||||| ||||||||| Sbjct 1844 AGAATAAAGAATTAGTTGAG 1863 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 111265965 Database: Eche_v2.0_cds.fasta Posted date: Jul 17, 2024 4:51 PM Number of letters in database: 37,600,338 Number of sequences in database: 30,099 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5