BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Eche_v2.0_cds.fasta
           30,099 sequences; 37,600,338 total letters



Query= Untitled_sequence

Length=20
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Erche07g009500.1.mRNA1.mrna1gene=Erche07g009500.1.mRNA1               38.1    4e-04
Erche07g009480.1.mRNA1.mrna1gene=Erche07g009480.1.mRNA1               38.1    4e-04
Erche03g032390.1.mRNA1.mrna1gene=Erche03g032390.1.mRNA1               38.1    4e-04
Erche02g041290.1.mRNA1.mrna1gene=Erche02g041290.1.mRNA1               32.5    0.018
Erche02g020410.1.mRNA1.mrna1gene=Erche02g020410.1.mRNA1               30.7    0.065
Erche02g042400.1.mRNA1.mrna1gene=Erche02g042400.1.mRNA1               27.0    0.84 
Erche02g013660.1.mRNA1.mrna1gene=Erche02g013660.1.mRNA1               27.0    0.84 
Erche01g027350.1.mRNA1.mrna1gene=Erche01g027350.1.mRNA1               27.0    0.84 
Erche01g027410.1.mRNA1.mrna1gene=Erche01g027410.1.mRNA1               27.0    0.84 


>Erche07g009500.1.mRNA1.mrna1 gene=Erche07g009500.1.mRNA1
Length=1488

 Score = 38.1 bits (20),  Expect = 4e-04
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1    CACAAGACCTCAAGTTCCCG  20
            ||||||||||||||||||||
Sbjct  573  CACAAGACCTCAAGTTCCCG  592


>Erche07g009480.1.mRNA1.mrna1 gene=Erche07g009480.1.mRNA1
Length=8238

 Score = 38.1 bits (20),  Expect = 4e-04
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1    CACAAGACCTCAAGTTCCCG  20
            ||||||||||||||||||||
Sbjct  492  CACAAGACCTCAAGTTCCCG  511


 Score = 38.1 bits (20),  Expect = 4e-04
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1     CACAAGACCTCAAGTTCCCG  20
             ||||||||||||||||||||
Sbjct  7359  CACAAGACCTCAAGTTCCCG  7378


>Erche03g032390.1.mRNA1.mrna1 gene=Erche03g032390.1.mRNA1
Length=2571

 Score = 38.1 bits (20),  Expect = 4e-04
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1    CACAAGACCTCAAGTTCCCG  20
            ||||||||||||||||||||
Sbjct  576  CACAAGACCTCAAGTTCCCG  595


>Erche02g041290.1.mRNA1.mrna1 gene=Erche02g041290.1.mRNA1
Length=2085

 Score = 32.5 bits (17),  Expect = 0.018
 Identities = 17/17 (100%), Gaps = 0/17 (0%)
 Strand=Plus/Minus

Query  1     CACAAGACCTCAAGTTC  17
             |||||||||||||||||
Sbjct  1963  CACAAGACCTCAAGTTC  1947


>Erche02g020410.1.mRNA1.mrna1 gene=Erche02g020410.1.mRNA1
Length=1599

 Score = 30.7 bits (16),  Expect = 0.065
 Identities = 16/16 (100%), Gaps = 0/16 (0%)
 Strand=Plus/Minus

Query  5    AGACCTCAAGTTCCCG  20
            ||||||||||||||||
Sbjct  355  AGACCTCAAGTTCCCG  340


>Erche02g042400.1.mRNA1.mrna1 gene=Erche02g042400.1.mRNA1
Length=711

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 16/17 (94%), Gaps = 0/17 (0%)
 Strand=Plus/Minus

Query  2    ACAAGACCTCAAGTTCC  18
            |||||||||| ||||||
Sbjct  431  ACAAGACCTCCAGTTCC  415


>Erche02g013660.1.mRNA1.mrna1 gene=Erche02g013660.1.mRNA1
Length=747

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  1    CACAAGACCTCAAG  14
            ||||||||||||||
Sbjct  464  CACAAGACCTCAAG  451


>Erche01g027350.1.mRNA1.mrna1 gene=Erche01g027350.1.mRNA1
Length=501

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 16/17 (94%), Gaps = 0/17 (0%)
 Strand=Plus/Minus

Query  1    CACAAGACCTCAAGTTC  17
            |||||| ||||||||||
Sbjct  382  CACAAGTCCTCAAGTTC  366


>Erche01g027410.1.mRNA1.mrna1 gene=Erche01g027410.1.mRNA1
Length=2373

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 16/17 (94%), Gaps = 0/17 (0%)
 Strand=Plus/Minus

Query  1     CACAAGACCTCAAGTTC  17
             |||||| ||||||||||
Sbjct  2251  CACAAGTCCTCAAGTTC  2235



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 111265965


  Database: Eche_v2.0_cds.fasta
    Posted date:  Jul 17, 2024  4:51 PM
  Number of letters in database: 37,600,338
  Number of sequences in database:  30,099



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5