BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Eche_v2.0_cds.fasta
           30,099 sequences; 37,600,338 total letters



Query= Untitled_sequence

Length=20
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Erche08g007620.1.mRNA1.mrna1gene=Erche08g007620.1.mRNA1               38.1    4e-04
Erche08g007290.1.mRNA1.mrna1gene=Erche08g007290.1.mRNA1               38.1    4e-04
Erche08g007270.1.mRNA1.mrna1gene=Erche08g007270.1.mRNA1               38.1    4e-04
Erche04g013840.1.mRNA1.mrna1gene=Erche04g013840.1.mRNA1               38.1    4e-04
Erche03g036131.1.mRNA1.mrna1gene=Erche03g036131.1.mRNA1               32.5    0.018
Erche01g045460.1.mRNA1.mrna1gene=Erche01g045460.1.mRNA1               32.5    0.018
Erche01g045600.1.mRNA1.mrna1gene=Erche01g045600.1.mRNA1               32.5    0.018
Erche02g018790.1.mRNA1.mrna1gene=Erche02g018790.1.mRNA1               30.7    0.065
Erche05g032615.1.mRNA1.mrna1gene=Erche05g032615.1.mRNA1               28.8    0.23 
Erche05g032520.1.mRNA1.mrna1gene=Erche05g032520.1.mRNA1               28.8    0.23 
Erche03g024280.1.mRNA1.mrna1gene=Erche03g024280.1.mRNA1               27.0    0.84 
Erche01g028180.1.mRNA1.mrna1gene=Erche01g028180.1.mRNA1               27.0    0.84 


>Erche08g007620.1.mRNA1.mrna1 gene=Erche08g007620.1.mRNA1
Length=1383

 Score = 38.1 bits (20),  Expect = 4e-04
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1     TACGAGGTTGACTTCGGATG  20
             ||||||||||||||||||||
Sbjct  1078  TACGAGGTTGACTTCGGATG  1097


>Erche08g007290.1.mRNA1.mrna1 gene=Erche08g007290.1.mRNA1
Length=3513

 Score = 38.1 bits (20),  Expect = 4e-04
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1     TACGAGGTTGACTTCGGATG  20
             ||||||||||||||||||||
Sbjct  3235  TACGAGGTTGACTTCGGATG  3254


 Score = 34.4 bits (18),  Expect = 0.005
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     TACGAGGTTGACTTCGGA  18
             ||||||||||||||||||
Sbjct  1111  TACGAGGTTGACTTCGGA  1128


>Erche08g007270.1.mRNA1.mrna1 gene=Erche08g007270.1.mRNA1
Length=1413

 Score = 38.1 bits (20),  Expect = 4e-04
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1     TACGAGGTTGACTTCGGATG  20
             ||||||||||||||||||||
Sbjct  1108  TACGAGGTTGACTTCGGATG  1127


>Erche04g013840.1.mRNA1.mrna1 gene=Erche04g013840.1.mRNA1
Length=1314

 Score = 38.1 bits (20),  Expect = 4e-04
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1     TACGAGGTTGACTTCGGATG  20
             ||||||||||||||||||||
Sbjct  1120  TACGAGGTTGACTTCGGATG  1139


>Erche03g036131.1.mRNA1.mrna1 gene=Erche03g036131.1.mRNA1
Length=912

 Score = 32.5 bits (17),  Expect = 0.018
 Identities = 19/20 (95%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1    TACGAGGTTGACTTCGGATG  20
            |||||| |||||||||||||
Sbjct  727  TACGAGATTGACTTCGGATG  746


>Erche01g045460.1.mRNA1.mrna1 gene=Erche01g045460.1.mRNA1
Length=1542

 Score = 32.5 bits (17),  Expect = 0.018
 Identities = 19/20 (95%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1   TACGAGGTTGACTTCGGATG  20
           |||||||| |||||||||||
Sbjct  73  TACGAGGTGGACTTCGGATG  92


 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 18/20 (90%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1     TACGAGGTTGACTTCGGATG  20
             ||||||||  ||||||||||
Sbjct  1360  TACGAGGTGAACTTCGGATG  1379


>Erche01g045600.1.mRNA1.mrna1 gene=Erche01g045600.1.mRNA1
Length=2358

 Score = 32.5 bits (17),  Expect = 0.018
 Identities = 19/20 (95%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1     TACGAGGTTGACTTCGGATG  20
             |||||||| |||||||||||
Sbjct  1006  TACGAGGTGGACTTCGGATG  1025


 Score = 32.5 bits (17),  Expect = 0.018
 Identities = 19/20 (95%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1     TACGAGGTTGACTTCGGATG  20
             |||||||| |||||||||||
Sbjct  2188  TACGAGGTGGACTTCGGATG  2207


>Erche02g018790.1.mRNA1.mrna1 gene=Erche02g018790.1.mRNA1
Length=1920

 Score = 30.7 bits (16),  Expect = 0.065
 Identities = 18/19 (95%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  1     TACGAGGTTGACTTCGGAT  19
             |||||| ||||||||||||
Sbjct  1036  TACGAGATTGACTTCGGAT  1054


>Erche05g032615.1.mRNA1.mrna1 gene=Erche05g032615.1.mRNA1
Length=315

 Score = 28.8 bits (15),  Expect = 0.23
 Identities = 15/15 (100%), Gaps = 0/15 (0%)
 Strand=Plus/Plus

Query  2    ACGAGGTTGACTTCG  16
            |||||||||||||||
Sbjct  143  ACGAGGTTGACTTCG  157


>Erche05g032520.1.mRNA1.mrna1 gene=Erche05g032520.1.mRNA1
Length=2622

 Score = 28.8 bits (15),  Expect = 0.23
 Identities = 15/15 (100%), Gaps = 0/15 (0%)
 Strand=Plus/Plus

Query  2    ACGAGGTTGACTTCG  16
            |||||||||||||||
Sbjct  341  ACGAGGTTGACTTCG  355


>Erche03g024280.1.mRNA1.mrna1 gene=Erche03g024280.1.mRNA1
Length=2805

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 16/17 (94%), Gaps = 0/17 (0%)
 Strand=Plus/Plus

Query  1     TACGAGGTTGACTTCGG  17
             ||||||||||| |||||
Sbjct  1171  TACGAGGTTGATTTCGG  1187


>Erche01g028180.1.mRNA1.mrna1 gene=Erche01g028180.1.mRNA1
Length=1311

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 18/20 (90%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1     TACGAGGTTGACTTCGGATG  20
             ||||||| ||| ||||||||
Sbjct  1105  TACGAGGCTGATTTCGGATG  1124



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 111265965


  Database: Eche_v2.0_cds.fasta
    Posted date:  Jul 17, 2024  4:51 PM
  Number of letters in database: 37,600,338
  Number of sequences in database:  30,099



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5