BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Eche_v2.0_cds.fasta 30,099 sequences; 37,600,338 total letters Query= Untitled_sequence Length=2325 Score E Sequences producing significant alignments: (Bits) Value Erche01g041250.1.mRNA1.mrna1gene=Erche01g041250.1.mRNA1 329 4e-89 >Erche01g041250.1.mRNA1.mrna1 gene=Erche01g041250.1.mRNA1 Length=885 Score = 329 bits (178), Expect = 4e-89 Identities = 490/639 (77%), Gaps = 27/639 (4%) Strand=Plus/Plus Query 1 ATGTTTGGTTTCTCGTTCTCTCGACGGAGAAAATCAAACGCTTTCACATG---GAAAGTT 57 ||||||||||||| ||||| |||| || ||||| |||| || ||| |||| | Sbjct 1 ATGTTTGGTTTCTTGTTCTGTCGATGGCGAAAA------GCTTCCAAATGTAAGAAATTG 54 Query 58 TTGAAACAGCTTCAATCTCGCCTTATGCTACTCAAGTCCCAGAAGTACGCAAAATCTAGA 117 ||| |||||||||||||||| |||| ||| |||||| | |||| ||||||| |||||| Sbjct 55 TTGCAACAGCTTCAATCTCGTCTTAAGCTGCTCAAGAACAAGAACTACGCAATTTCTAGA 114 Query 118 CACCTACGTGCTGATATTGTTGACTTCATCCGAAGCAACGAC--TCCAAGAGTGCACTCT 175 || ||||| ||||||| | ||||||||||| ||| ||| | || || | ||| Sbjct 115 CATTTACGTCACGATATTGCTCTCTTCATCCGAATCAATGACCCTTCACGA--CCTCTCC 172 Query 176 TCCGAACCGAACAGCTCTTGCTCGTCGAAAACGCGATTACAATCTACGGTTTTTTGCT-C 234 | || ||| | |||||||| ||||| |||||| || || ||||||||| ||| ||||| | Sbjct 173 TTCGGACCAATCAGCTCTTCCTCGTTGAAAACTCGGTTTCAATCTACGATTTGTTGCTTC 232 Query 235 AAGTTCACTGATTTCATCCTCCTCCGCTTCTCCCCCAGTAAAAAACACAGTTGTTTATTG 294 || ||| |||| |||||| |||||| ||||||| ||| |||||||||||| | |||| Sbjct 233 AA-TTCTCTGACTTCATCATCCTCCACTTCTCCTCCATTAAAAAACACAG-AG--AATTG 288 Query 295 GTTAATGATGATACTTCCGAAGCAGTTTCGAGTCTGATTTTTGCATCGGTCAA-GTGTAG 353 ||||||| | | | |||||||||||||||||| | ||||| || | ||| |||| | Sbjct 289 CTTAATGACAAGATTAACGAAGCAGTTTCGAGTCTTGTCTTTGCCTCTG-CAAGGTGTGG 347 Query 354 AGAAATACCTGAACTGCTAATTATTAGCGAGCTGGTTGGTCAACGTTATGGTCAACGTTA 413 |||| |||||||||| || | ||||| ||||| || |||||||||| |||||||| || Sbjct 348 AGAATTACCTGAACTACTTAGCATTAGAGAGCTATTTTGTCAACGTTACGGTCAACGCTA 407 Query 414 TGTAACAACTGCTATTCAGGTCCCTCCCGGGAA-TCTTGTAAAC-ACTGAGATCAAAGAG 471 |||||||| |||| ||||| ||| |||| |||| | |||| ||| || ||||||||||| Sbjct 408 TGTAACAAGTGCTCTTCAGCTCC-TCCCTGGAACTTTTGTTAACCACC-AGATCAAAGAG 465 Query 472 AAATTGAAGTCAACTTCAGTAGTATCCGAAACTGATAAGTGTAGAGTAATGGAGGAGATA 531 |||||| | |||||| | ||||||||| || |||| |||| | |||| || ||| Sbjct 466 AAATTGTCGATAACTTC-G--GTATCCGAAGATGTGAAGTCTAGATTGTTGGATGAAATA 522 Query 532 GCCAAGGAGTCGGGTTACCGTTTAGAAATTCTAGGGCTGGGATATAAATCTGAGATTGAC 591 || |||||||| || || ||||||||| || |||| | ||||| | |||||| ||| Sbjct 523 GCGAAGGAGTCTGGACACAATTTAGAAATATTAAGGCTAGAATATACACCTGAGAATGAA 582 Query 592 AACGAGGTTTTTGACTTGGAAGAAAAGAACGTAATGGAT 630 || |||| ||| |||||| ||||| ||||||||| Sbjct 583 AAACAGGTAAATGAAGAGGAAGAGAAGAAAGTAATGGAT 621 Score = 202 bits (109), Expect = 1e-50 Identities = 207/253 (82%), Gaps = 12/253 (5%) Strand=Plus/Plus Query 1417 GAAGCTTTGAAGTGTAGAATGTTGGATGATATATTGAAGAAGTCCGGTCACCGTTTAGAA 1476 |||| | |||||| |||| |||||||||| ||| |||| |||| || ||| ||||||| Sbjct 490 GAAGATGTGAAGTCTAGATTGTTGGATGAAATAGCGAAGGAGTCTGGACACAATTTAGAA 549 Query 1477 ATATCAAGGCGGCAATATAATAAACCTGAGATTGAAATACAGGTCAATGAAAAGGAAGAG 1536 |||| ||||| | || ||| |||||||| ||||| |||||| |||||| |||||||| Sbjct 550 ATATTAAGGC-TAGA-AT-ATACACCTGAGAATGAAAAACAGGTAAATGAAGAGGAAGAG 606 Query 1537 AAGAAAGTAAT-CA-----ATACGGATATGGATATTAGATATGATGATGAGTCACCAGAA 1590 ||||||||||| | ||| ||||||| ||||||| | ||||||| ||||||||||| Sbjct 607 AAGAAAGTAATGGATTTGGATATGGATATGAATATTAGCTCTGATGATCAGTCACCAGAA 666 Query 1591 GAGGTGGAGACATATTCTAGTCTCACGGATGATGAAGAAGAGAGAAGCAAGGAAGATACA 1650 || ||| | | | |||| || ||||| |||| |||||||||||||||||||||||||||| Sbjct 667 GAAGTGTATA-A-ATTC-AGCCTCACCGATGTTGAAGAAGAGAGAAGCAAGGAAGATACA 723 Query 1651 TCAATGGAAGATG 1663 |||||||||||| Sbjct 724 ACAATGGAAGATG 736 Score = 202 bits (109), Expect = 1e-50 Identities = 172/203 (85%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 1678 GAGGTGTACAAATTTAGCCTCACCGATATCAAAGAAGAGAGAAGCAATGAAGATACATCA 1737 || ||||| ||||| |||||||||||| | |||||||||||||||| ||||||||| || Sbjct 667 GAAGTGTATAAATTCAGCCTCACCGATGTTGAAGAAGAGAGAAGCAAGGAAGATACAACA 726 Query 1738 ATGGAAGATTGTTGCATAGAAGAGGCTCAAGTCGGAAAAGATCAAAGAGTCTTCAGATTC 1797 ||||||||| || |||||||||| ||||||| ||||||||||| ||||| |||||||| Sbjct 727 ATGGAAGATGATTACATAGAAGAGACTCAAGTGGGAAAAGATCAGAGAGTATTCAGATTT 786 Query 1798 AGAGAAAGTAGTGAAGA-GAAGAGAAAATCCTCATCATCACCATTATCACCACTAACAGA 1856 ||||||||||||||||| ||| |||| | ||||||||| ||||| || || ||| | Sbjct 787 AGAGAAAGTAGTGAAGAAGAA-AGAAGGTTATCATCATCATCATTAGCATCATTAAAACG 845 Query 1857 GTTTAGGGATATGGAGAGTTTGA 1879 ||||||||| || |||||||||| Sbjct 846 GTTTAGGGACATTGAGAGTTTGA 868 Score = 191 bits (103), Expect = 2e-47 Identities = 180/217 (83%), Gaps = 6/217 (3%) Strand=Plus/Plus Query 1186 GAAGGTGTGAAGTGTAGAATGTTGGATGAAATAATGAAGAAGTCCGGTCACCATTTAAAA 1245 |||| |||||||| |||| |||||||||||||| |||| |||| || ||| ||||| || Sbjct 490 GAAGATGTGAAGTCTAGATTGTTGGATGAAATAGCGAAGGAGTCTGGACACAATTTAGAA 549 Query 1246 ATATCAAGGCCGGAATATAAACCTGAGATTGAAAAACAGGTATATGAAGAGGAAGAGAAG 1305 |||| ||||| ||||||| |||||||| ||||||||||||| ||||||||||||||||| Sbjct 550 ATATTAAGGCTAGAATATACACCTGAGAATGAAAAACAGGTAAATGAAGAGGAAGAGAAG 609 Query 1306 AAAGTAATGGATCCAGATGTGGATATTAG-AT--G-T-T-ATGAAGAGTCACCACACGAG 1359 |||||||||||| ||| ||||||| | || | | | |||| |||||||| | || Sbjct 610 AAAGTAATGGATTTGGATATGGATATGAATATTAGCTCTGATGATCAGTCACCAGAAGAA 669 Query 1360 GTGTCTAAATTTAGCCTCACCGATTTCGAAGAAGAGA 1396 |||| |||||| |||||||||||| | |||||||||| Sbjct 670 GTGTATAAATTCAGCCTCACCGATGTTGAAGAAGAGA 706 Score = 183 bits (99), Expect = 4e-45 Identities = 170/204 (83%), Gaps = 6/204 (3%) Strand=Plus/Plus Query 734 CTAGATTGTTGGCTGAAAATGCGAAGAAGTCCGGTCACAGTTTAGAAATATTAAGGCCGG 793 |||||||||||| ||||| |||||| |||| || |||| ||||||||||||||||| | Sbjct 503 CTAGATTGTTGGATGAAATAGCGAAGGAGTCTGGACACAATTTAGAAATATTAAGGCTAG 562 Query 794 AATCTAAACCTGAGACTGAAAAAGAGGTCAATGAAGAGGAAGAGAAGAGAGTAATGGATC 853 ||| || |||||||| ||||||| |||| ||||||||||||||||||| |||||||||| Sbjct 563 AATATACACCTGAGAATGAAAAACAGGTAAATGAAGAGGAAGAGAAGAAAGTAATGGATT 622 Query 854 CGGATGTGGATATTAGT-T--G-T-T-ATGAAGAGTCACCACACGAGGTGTATAAATTTA 907 |||| ||||||| | | | | | | |||| |||||||| | || ||||||||||| | Sbjct 623 TGGATATGGATATGAATATTAGCTCTGATGATCAGTCACCAGAAGAAGTGTATAAATTCA 682 Query 908 GCCTCACCGATTTCGAAGAAGAGA 931 ||||||||||| | |||||||||| Sbjct 683 GCCTCACCGATGTTGAAGAAGAGA 706 Score = 165 bits (89), Expect = 1e-39 Identities = 178/220 (81%), Gaps = 9/220 (4%) Strand=Plus/Plus Query 952 GAAGATATGAAGTGTAGAATGTTGGATGATATAGTGAAGAATTCCGGTCACCGTGTAGAA 1011 |||||| |||||| |||| |||||||||| |||| |||| | || || ||| | ||||| Sbjct 490 GAAGATGTGAAGTCTAGATTGTTGGATGAAATAGCGAAGGAGTCTGGACACAATTTAGAA 549 Query 1012 ATATCAAGGCCGGAATATTATAAACCTGAGATTGAAAAACAGGTATATGAAAAGGAAGAG 1071 |||| ||||| ||| |||| |||||||| ||||||||||||| ||||| |||||||| Sbjct 550 ATATTAAGGCTAGAA---TATACACCTGAGAATGAAAAACAGGTAAATGAAGAGGAAGAG 606 Query 1072 AAGAAAGTAATGGATCCGGATATC--T----ATATTAGATCTTATGAAGAGTCACCAAAC 1125 ||||||||||||||| |||||| | ||||||| ||| |||| |||||||| | Sbjct 607 AAGAAAGTAATGGATTTGGATATGGATATGAATATTAGCTCTGATGATCAGTCACCAGAA 666 Query 1126 GAGGTGTATAAATTTAGCCTCACTGATTTGGAAGAAGAGA 1165 || ||||||||||| |||||||| ||| | |||||||||| Sbjct 667 GAAGTGTATAAATTCAGCCTCACCGATGTTGAAGAAGAGA 706 Score = 91.6 bits (49), Expect = 2e-17 Identities = 81/96 (84%), Gaps = 3/96 (3%) Strand=Plus/Plus Query 628 GATGAGTCACTACACGAGGTGTATAAATTTTGCCTCACCGATGTT---GATGAGAGAAGC 684 ||| |||||| | | || ||||||||||| |||||||||||||| || ||||||||| Sbjct 652 GATCAGTCACCAGAAGAAGTGTATAAATTCAGCCTCACCGATGTTGAAGAAGAGAGAAGC 711 Query 685 AAGAAAGAGACATCAATGAAAGATGATTACATAGAA 720 ||| |||| ||| ||||| ||||||||||||||||| Sbjct 712 AAGGAAGATACAACAATGGAAGATGATTACATAGAA 747 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 84644039436 Database: Eche_v2.0_cds.fasta Posted date: Jul 17, 2024 4:51 PM Number of letters in database: 37,600,338 Number of sequences in database: 30,099 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5