BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Eche_v2.0_cds.fasta
           30,099 sequences; 37,600,338 total letters



Query= Untitled_sequence

Length=20
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Erche06g008220.1.mRNA1.mrna1gene=Erche06g008220.1.mRNA1               38.1    4e-04
Erche03g008640.1.mRNA1.mrna1gene=Erche03g008640.1.mRNA1               38.1    4e-04
Erche01g036050.2.mRNA1.mrna1gene=Erche01g036050.2.mRNA1               30.7    0.065
Erche06g030150.1.mRNA1.mrna1gene=Erche06g030150.1.mRNA1               28.8    0.23 
Erche06g026390.1.mRNA1.mrna1gene=Erche06g026390.1.mRNA1               28.8    0.23 
Erche08g018170.1.mRNA1.mrna1gene=Erche08g018170.1.mRNA1               27.0    0.84 
Erche07g021210.1.mRNA1.mrna1gene=Erche07g021210.1.mRNA1               27.0    0.84 
Erche05g021470.1.mRNA1.mrna1gene=Erche05g021470.1.mRNA1               27.0    0.84 
Erche04g005870.1.mRNA1.mrna1gene=Erche04g005870.1.mRNA1               27.0    0.84 
Erche03g041230.1.mRNA1.mrna1gene=Erche03g041230.1.mRNA1               27.0    0.84 
Erche02g004440.1.mRNA1.mrna1gene=Erche02g004440.1.mRNA1               27.0    0.84 
Erche01g008140.1.mRNA1.mrna1gene=Erche01g008140.1.mRNA1               27.0    0.84 


>Erche06g008220.1.mRNA1.mrna1 gene=Erche06g008220.1.mRNA1
Length=1197

 Score = 38.1 bits (20),  Expect = 4e-04
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1   TCAAGAAAGCCATGTTGTGT  20
           ||||||||||||||||||||
Sbjct  4   TCAAGAAAGCCATGTTGTGT  23


>Erche03g008640.1.mRNA1.mrna1 gene=Erche03g008640.1.mRNA1
Length=822

 Score = 38.1 bits (20),  Expect = 4e-04
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1   TCAAGAAAGCCATGTTGTGT  20
           ||||||||||||||||||||
Sbjct  4   TCAAGAAAGCCATGTTGTGT  23


>Erche01g036050.2.mRNA1.mrna1 gene=Erche01g036050.2.mRNA1
Length=1479

 Score = 30.7 bits (16),  Expect = 0.065
 Identities = 16/16 (100%), Gaps = 0/16 (0%)
 Strand=Plus/Plus

Query  4    AGAAAGCCATGTTGTG  19
            ||||||||||||||||
Sbjct  564  AGAAAGCCATGTTGTG  579


>Erche06g030150.1.mRNA1.mrna1 gene=Erche06g030150.1.mRNA1
Length=1017

 Score = 28.8 bits (15),  Expect = 0.23
 Identities = 17/18 (94%), Gaps = 0/18 (0%)
 Strand=Plus/Minus

Query  3   AAGAAAGCCATGTTGTGT  20
           |||||||| |||||||||
Sbjct  96  AAGAAAGCTATGTTGTGT  79


>Erche06g026390.1.mRNA1.mrna1 gene=Erche06g026390.1.mRNA1
Length=954

 Score = 28.8 bits (15),  Expect = 0.23
 Identities = 15/15 (100%), Gaps = 0/15 (0%)
 Strand=Plus/Plus

Query  1    TCAAGAAAGCCATGT  15
            |||||||||||||||
Sbjct  128  TCAAGAAAGCCATGT  142


>Erche08g018170.1.mRNA1.mrna1 gene=Erche08g018170.1.mRNA1
Length=3855

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  1     TCAAGAAAGCCATG  14
             ||||||||||||||
Sbjct  2754  TCAAGAAAGCCATG  2767


>Erche07g021210.1.mRNA1.mrna1 gene=Erche07g021210.1.mRNA1
Length=1377

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 18/20 (90%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1    TCAAGAAAGCCATGTTGTGT  20
            |||||||||| | |||||||
Sbjct  596  TCAAGAAAGCTAAGTTGTGT  615


>Erche05g021470.1.mRNA1.mrna1 gene=Erche05g021470.1.mRNA1
Length=3987

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  1    TCAAGAAAGCCATG  14
            ||||||||||||||
Sbjct  410  TCAAGAAAGCCATG  423


>Erche04g005870.1.mRNA1.mrna1 gene=Erche04g005870.1.mRNA1
Length=1065

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  2     CAAGAAAGCCATGT  15
             ||||||||||||||
Sbjct  1024  CAAGAAAGCCATGT  1037


>Erche03g041230.1.mRNA1.mrna1 gene=Erche03g041230.1.mRNA1
Length=2490

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 16/17 (94%), Gaps = 0/17 (0%)
 Strand=Plus/Plus

Query  1    TCAAGAAAGCCATGTTG  17
            |||||||| ||||||||
Sbjct  195  TCAAGAAACCCATGTTG  211


>Erche02g004440.1.mRNA1.mrna1 gene=Erche02g004440.1.mRNA1
Length=1398

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  1    TCAAGAAAGCCATG  14
            ||||||||||||||
Sbjct  262  TCAAGAAAGCCATG  249


>Erche01g008140.1.mRNA1.mrna1 gene=Erche01g008140.1.mRNA1
Length=1008

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  2    CAAGAAAGCCATGT  15
            ||||||||||||||
Sbjct  934  CAAGAAAGCCATGT  947



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 111265965


  Database: Eche_v2.0_cds.fasta
    Posted date:  Jul 17, 2024  4:51 PM
  Number of letters in database: 37,600,338
  Number of sequences in database:  30,099



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5