BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Eche_v2.0_cds.fasta
           30,099 sequences; 37,600,338 total letters



Query= Untitled_sequence

Length=20
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Erche08g007620.1.mRNA1.mrna1gene=Erche08g007620.1.mRNA1               38.1    4e-04
Erche08g007290.1.mRNA1.mrna1gene=Erche08g007290.1.mRNA1               38.1    4e-04
Erche08g007270.1.mRNA1.mrna1gene=Erche08g007270.1.mRNA1               38.1    4e-04
Erche01g045460.1.mRNA1.mrna1gene=Erche01g045460.1.mRNA1               32.5    0.018
Erche01g045600.1.mRNA1.mrna1gene=Erche01g045600.1.mRNA1               32.5    0.018
Erche02g018800.1.mRNA1.mrna1gene=Erche02g018800.1.mRNA1               28.8    0.23 
Erche04g013840.1.mRNA1.mrna1gene=Erche04g013840.1.mRNA1               27.0    0.84 
Erche03g036131.1.mRNA1.mrna1gene=Erche03g036131.1.mRNA1               27.0    0.84 
Erche02g018790.1.mRNA1.mrna1gene=Erche02g018790.1.mRNA1               27.0    0.84 


>Erche08g007620.1.mRNA1.mrna1 gene=Erche08g007620.1.mRNA1
Length=1383

 Score = 38.1 bits (20),  Expect = 4e-04
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1     ATGGATTCAAAGGACGGTGA  20
             ||||||||||||||||||||
Sbjct  1165  ATGGATTCAAAGGACGGTGA  1184


>Erche08g007290.1.mRNA1.mrna1 gene=Erche08g007290.1.mRNA1
Length=3513

 Score = 38.1 bits (20),  Expect = 4e-04
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1     ATGGATTCAAAGGACGGTGA  20
             ||||||||||||||||||||
Sbjct  1198  ATGGATTCAAAGGACGGTGA  1217


 Score = 38.1 bits (20),  Expect = 4e-04
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1     ATGGATTCAAAGGACGGTGA  20
             ||||||||||||||||||||
Sbjct  3322  ATGGATTCAAAGGACGGTGA  3341


>Erche08g007270.1.mRNA1.mrna1 gene=Erche08g007270.1.mRNA1
Length=1413

 Score = 38.1 bits (20),  Expect = 4e-04
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1     ATGGATTCAAAGGACGGTGA  20
             ||||||||||||||||||||
Sbjct  1195  ATGGATTCAAAGGACGGTGA  1214


>Erche01g045460.1.mRNA1.mrna1 gene=Erche01g045460.1.mRNA1
Length=1542

 Score = 32.5 bits (17),  Expect = 0.018
 Identities = 19/20 (95%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1    ATGGATTCAAAGGACGGTGA  20
            |||||| |||||||||||||
Sbjct  151  ATGGATGCAAAGGACGGTGA  170


 Score = 32.5 bits (17),  Expect = 0.018
 Identities = 19/20 (95%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1     ATGGATTCAAAGGACGGTGA  20
             |||||| |||||||||||||
Sbjct  1444  ATGGATGCAAAGGACGGTGA  1463


>Erche01g045600.1.mRNA1.mrna1 gene=Erche01g045600.1.mRNA1
Length=2358

 Score = 32.5 bits (17),  Expect = 0.018
 Identities = 19/20 (95%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1     ATGGATTCAAAGGACGGTGA  20
             |||||| |||||||||||||
Sbjct  1090  ATGGATGCAAAGGACGGTGA  1109


 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 18/20 (90%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1     ATGGATTCAAAGGACGGTGA  20
             |||||| ||||| |||||||
Sbjct  2272  ATGGATGCAAAGAACGGTGA  2291


>Erche02g018800.1.mRNA1.mrna1 gene=Erche02g018800.1.mRNA1
Length=3279

 Score = 28.8 bits (15),  Expect = 0.23
 Identities = 17/18 (94%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     ATGGATTCAAAGGACGGT  18
             |||||||||||||| |||
Sbjct  3154  ATGGATTCAAAGGATGGT  3171


>Erche04g013840.1.mRNA1.mrna1 gene=Erche04g013840.1.mRNA1
Length=1314

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 18/20 (90%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1     ATGGATTCAAAGGACGGTGA  20
             |||||| ||||||| |||||
Sbjct  1201  ATGGATGCAAAGGATGGTGA  1220


>Erche03g036131.1.mRNA1.mrna1 gene=Erche03g036131.1.mRNA1
Length=912

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 18/20 (90%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1    ATGGATTCAAAGGACGGTGA  20
            |||||| |||||||| ||||
Sbjct  808  ATGGATGCAAAGGACCGTGA  827


>Erche02g018790.1.mRNA1.mrna1 gene=Erche02g018790.1.mRNA1
Length=1920

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 18/20 (90%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1     ATGGATTCAAAGGACGGTGA  20
             || |||||||| ||||||||
Sbjct  1123  ATTGATTCAAAAGACGGTGA  1142



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 111265965


  Database: Eche_v2.0_cds.fasta
    Posted date:  Jul 17, 2024  4:51 PM
  Number of letters in database: 37,600,338
  Number of sequences in database:  30,099



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5