BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Eche_v2.0_cds.fasta 30,099 sequences; 37,600,338 total letters Query= Untitled_sequence Length=20 Score E Sequences producing significant alignments: (Bits) Value Erche07g009500.1.mRNA1.mrna1gene=Erche07g009500.1.mRNA1 38.1 4e-04 Erche07g009480.1.mRNA1.mrna1gene=Erche07g009480.1.mRNA1 38.1 4e-04 Erche03g029150.1.mRNA1.mrna1gene=Erche03g029150.1.mRNA1 38.1 4e-04 Erche03g031840.1.mRNA1.mrna1gene=Erche03g031840.1.mRNA1 38.1 4e-04 Erche03g032390.1.mRNA1.mrna1gene=Erche03g032390.1.mRNA1 38.1 4e-04 Erche03g034130.1.mRNA1.mrna1gene=Erche03g034130.1.mRNA1 38.1 4e-04 Erche01g035760.1.mRNA1.mrna1gene=Erche01g035760.1.mRNA1 38.1 4e-04 Erche01g035910.1.mRNA1.mrna1gene=Erche01g035910.1.mRNA1 38.1 4e-04 Erche01g035780.1.mRNA1.mrna1gene=Erche01g035780.1.mRNA1 34.4 0.005 Erche01g035790.1.mRNA1.mrna1gene=Erche01g035790.1.mRNA1 34.4 0.005 Erche08g002750.1.mRNA1.mrna1gene=Erche08g002750.1.mRNA1 27.0 0.84 Erche06g006470.1.mRNA1.mrna1gene=Erche06g006470.1.mRNA1 27.0 0.84 Erche06g031240.1.mRNA1.mrna1gene=Erche06g031240.1.mRNA1 27.0 0.84 Erche05g013080.1.mRNA1.mrna1gene=Erche05g013080.1.mRNA1 27.0 0.84 Erche04g007620.1.mRNA1.mrna1gene=Erche04g007620.1.mRNA1 27.0 0.84 Erche04g021730.1.mRNA1.mrna1gene=Erche04g021730.1.mRNA1 27.0 0.84 >Erche07g009500.1.mRNA1.mrna1 gene=Erche07g009500.1.mRNA1 Length=1488 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGACCCAAATGAAAGGTCTT 20 |||||||||||||||||||| Sbjct 967 TGACCCAAATGAAAGGTCTT 948 >Erche07g009480.1.mRNA1.mrna1 gene=Erche07g009480.1.mRNA1 Length=8238 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGACCCAAATGAAAGGTCTT 20 |||||||||||||||||||| Sbjct 886 TGACCCAAATGAAAGGTCTT 867 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGACCCAAATGAAAGGTCTT 20 |||||||||||||||||||| Sbjct 2227 TGACCCAAATGAAAGGTCTT 2208 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGACCCAAATGAAAGGTCTT 20 |||||||||||||||||||| Sbjct 5317 TGACCCAAATGAAAGGTCTT 5298 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGACCCAAATGAAAGGTCTT 20 |||||||||||||||||||| Sbjct 7753 TGACCCAAATGAAAGGTCTT 7734 Score = 27.0 bits (14), Expect = 0.84 Identities = 18/20 (90%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGACCCAAATGAAAGGTCTT 20 |||||||||||||| |||| Sbjct 3694 TGACCCAAATGAAATTTCTT 3675 >Erche03g029150.1.mRNA1.mrna1 gene=Erche03g029150.1.mRNA1 Length=2616 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGACCCAAATGAAAGGTCTT 20 |||||||||||||||||||| Sbjct 1333 TGACCCAAATGAAAGGTCTT 1314 >Erche03g031840.1.mRNA1.mrna1 gene=Erche03g031840.1.mRNA1 Length=1377 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGACCCAAATGAAAGGTCTT 20 |||||||||||||||||||| Sbjct 904 TGACCCAAATGAAAGGTCTT 885 >Erche03g032390.1.mRNA1.mrna1 gene=Erche03g032390.1.mRNA1 Length=2571 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGACCCAAATGAAAGGTCTT 20 |||||||||||||||||||| Sbjct 970 TGACCCAAATGAAAGGTCTT 951 >Erche03g034130.1.mRNA1.mrna1 gene=Erche03g034130.1.mRNA1 Length=1425 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGACCCAAATGAAAGGTCTT 20 |||||||||||||||||||| Sbjct 904 TGACCCAAATGAAAGGTCTT 885 >Erche01g035760.1.mRNA1.mrna1 gene=Erche01g035760.1.mRNA1 Length=6111 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGACCCAAATGAAAGGTCTT 20 |||||||||||||||||||| Sbjct 862 TGACCCAAATGAAAGGTCTT 843 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGACCCAAATGAAAGGTCTT 20 |||||||||||||||||||| Sbjct 3643 TGACCCAAATGAAAGGTCTT 3624 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGACCCAAATGAAAGGTCTT 20 |||||||||||||||||||| Sbjct 4915 TGACCCAAATGAAAGGTCTT 4896 Score = 32.5 bits (17), Expect = 0.018 Identities = 19/20 (95%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGACCCAAATGAAAGGTCTT 20 ||||||| |||||||||||| Sbjct 2389 TGACCCACATGAAAGGTCTT 2370 >Erche01g035910.1.mRNA1.mrna1 gene=Erche01g035910.1.mRNA1 Length=2535 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGACCCAAATGAAAGGTCTT 20 |||||||||||||||||||| Sbjct 856 TGACCCAAATGAAAGGTCTT 837 >Erche01g035780.1.mRNA1.mrna1 gene=Erche01g035780.1.mRNA1 Length=789 Score = 34.4 bits (18), Expect = 0.005 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 3 ACCCAAATGAAAGGTCTT 20 |||||||||||||||||| Sbjct 443 ACCCAAATGAAAGGTCTT 426 >Erche01g035790.1.mRNA1.mrna1 gene=Erche01g035790.1.mRNA1 Length=2337 Score = 34.4 bits (18), Expect = 0.005 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 3 ACCCAAATGAAAGGTCTT 20 |||||||||||||||||| Sbjct 1826 ACCCAAATGAAAGGTCTT 1809 >Erche08g002750.1.mRNA1.mrna1 gene=Erche08g002750.1.mRNA1 Length=588 Score = 27.0 bits (14), Expect = 0.84 Identities = 16/17 (94%), Gaps = 0/17 (0%) Strand=Plus/Plus Query 4 CCCAAATGAAAGGTCTT 20 |||||| |||||||||| Sbjct 443 CCCAAAGGAAAGGTCTT 459 >Erche06g006470.1.mRNA1.mrna1 gene=Erche06g006470.1.mRNA1 Length=1272 Score = 27.0 bits (14), Expect = 0.84 Identities = 16/17 (94%), Gaps = 0/17 (0%) Strand=Plus/Plus Query 4 CCCAAATGAAAGGTCTT 20 |||||| |||||||||| Sbjct 509 CCCAAAGGAAAGGTCTT 525 >Erche06g031240.1.mRNA1.mrna1 gene=Erche06g031240.1.mRNA1 Length=4602 Score = 27.0 bits (14), Expect = 0.84 Identities = 16/17 (94%), Gaps = 0/17 (0%) Strand=Plus/Minus Query 4 CCCAAATGAAAGGTCTT 20 |||||||||||| |||| Sbjct 3862 CCCAAATGAAAGCTCTT 3846 >Erche05g013080.1.mRNA1.mrna1 gene=Erche05g013080.1.mRNA1 Length=585 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Plus Query 5 CCAAATGAAAGGTC 18 |||||||||||||| Sbjct 531 CCAAATGAAAGGTC 544 >Erche04g007620.1.mRNA1.mrna1 gene=Erche04g007620.1.mRNA1 Length=4611 Score = 27.0 bits (14), Expect = 0.84 Identities = 16/17 (94%), Gaps = 0/17 (0%) Strand=Plus/Minus Query 4 CCCAAATGAAAGGTCTT 20 |||||||||||| |||| Sbjct 3883 CCCAAATGAAAGCTCTT 3867 >Erche04g021730.1.mRNA1.mrna1 gene=Erche04g021730.1.mRNA1 Length=1128 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Plus Query 3 ACCCAAATGAAAGG 16 |||||||||||||| Sbjct 841 ACCCAAATGAAAGG 854 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 111265965 Database: Eche_v2.0_cds.fasta Posted date: Jul 17, 2024 4:51 PM Number of letters in database: 37,600,338 Number of sequences in database: 30,099 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5