BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Eche_v2.0_cds.fasta 30,099 sequences; 37,600,338 total letters Query= Untitled_sequence Length=1020 Score E Sequences producing significant alignments: (Bits) Value Contig16g000540.1.mRNA1gene=Contig16g000540.1 1849 0.0 >Contig16g000540.1.mRNA1 gene=Contig16g000540.1 Length=3093 Score = 1849 bits (1001), Expect = 0.0 Identities = 1018/1025 (99%), Gaps = 5/1025 (0%) Strand=Plus/Plus Query 1 AACTTGGTCCCGGGCATCGTGGGCGAACGACGGGAATTGAACCCGCGATGGTGAATTCAC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 105 AACTTGGTCCCGGGCATCGTGGGCGAACGACGGGAATTGAACCCGCGATGGTGAATTCAC 164 Query 61 AATCCACTGCCTTAATCCACTTGGCTACATCCGCCC-----CTACTCTACTATAATCTAT 115 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 165 AATCCACTGCCTTAATCCACTTGGCTACATCCGCCCCTACTCTACTCTACTATAATCTAT 224 Query 116 TCTTTTTTGTATTGTCTAAAATAAAAACACATAGATTTCAATAAAAAAGGTAGAAAATTC 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 225 TCTTTTTTGTATTGTCTAAAATAAAAACACATAGATTTCAATAAAAAAGGTAGAAAATTC 284 Query 176 CACCTTACTTTTTTTCTAAAGTAAAAAATTATAGTAGTACTTTTATATTAATATAAAAGA 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 285 CACCTTACTTTTTTTCTAAAGTAAAAAATTATAGTAGTACTTTTATATTAATATAAAAGA 344 Query 236 AAAATATGATACTCTATAAAATCAAAATTTGCTCGTTTTTATAGAAAAAAAACGAGCAAT 295 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 345 AAAATATGATACTCTATAAAATAAAAATTTGCTCGTTTTTATAGAAAAAAAACGAGCAAT 404 Query 296 ATAAGCCTTCTTTTTAATTTAAAAAAGGCTTATATTGCTCGTTTTTTACTAAACTAGATC 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 405 ATAAGCCTTCTTTTTAATTTAAAAAAGGCTTATATTGCTCGTTTTTTACTAAACTAGATC 464 Query 356 TAGACTAACACTCTAACACTAAGGAATTATCCGTTTGTAGACGGAGCCTCAACAGCAGCT 415 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 465 TAGACTAACACTCTAACACTAAGGAATTATCCGTTTGTAGATGGAGCCTCAACAGCAGCT 524 Query 416 AGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTAGCA 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 525 AGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTAGCA 584 Query 476 CGGTTAATAATATCAGCCCAAGTATTAATAACACGTCCTTGACTATCAACTACTGATTGG 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 585 CGGTTAATAATATCAGCCCAAGTATTAATAACACGTCCTTGACTATCAACTACTGATTGG 644 Query 536 TTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAAAGCAGTAAACCAA 595 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 645 TTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAAAGCAGTAAACCAA 704 Query 596 ATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGAACGAGAATTGTTGAAACTA 655 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 705 ATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGAACGAGAATTGTTGAAACTA 764 Query 656 GCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACAATGTTGTAAGTTTCT 715 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 765 GCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACAATGTTGTAAGTTTCT 824 Query 716 TCTTCTTGCCCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATC 775 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 825 TCTTCTTGCCCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATC 884 Query 776 AAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAACAGGGAGCCGCCGAATACACCA 835 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 885 AAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAACAGGGAGCCGCCGAATACACCA 944 Query 836 GCTACACCTAACATGTGAAATGGGTGCATAAGAATGTTGTGCTCAGCCTGGAATACAATC 895 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 945 GCTACACCTAACATGTGAAATGGGTGCATAAGAATGTTGTGCTCAGCCTGGAATACAATC 1004 Query 896 ATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCCCTGACCA 955 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1005 ATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCCCTGACCA 1064 Query 956 ATTGGATAGATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAATATGCAACAGCA 1015 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1065 ATTGGATAGATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAATATGCAACAGCA 1124 Query 1016 ATCCA 1020 ||||| Sbjct 1125 ATCCA 1129 Score = 91.6 bits (49), Expect = 1e-17 Identities = 58/62 (94%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 282 AAAAAACGAGCAATATAAGCCTTCTTTTTAATTTAAAA-AAGGCTTATATTGCTCGTTTT 340 ||||||||||||||||||||||| |||| |||| |||| ||||||||||||||||||||| Sbjct 451 AAAAAACGAGCAATATAAGCCTT-TTTTAAATTAAAAAGAAGGCTTATATTGCTCGTTTT 393 Query 341 TT 342 || Sbjct 392 TT 391 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 36663623685 Database: Eche_v2.0_cds.fasta Posted date: Jul 17, 2024 4:51 PM Number of letters in database: 37,600,338 Number of sequences in database: 30,099 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5