BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Eche_v2.0_cds.fasta
           30,099 sequences; 37,600,338 total letters



Query= Untitled_sequence

Length=20
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Erche07g009500.1.mRNA1.mrna1gene=Erche07g009500.1.mRNA1               38.1    4e-04
Erche03g032390.1.mRNA1.mrna1gene=Erche03g032390.1.mRNA1               38.1    4e-04
Erche05g021880.1.mRNA1.mrna1gene=Erche05g021880.1.mRNA1               28.8    0.23 
Erche08g027080.1.mRNA1.mrna1gene=Erche08g027080.1.mRNA1               27.0    0.84 
Erche08g029790.1.mRNA1.mrna1gene=Erche08g029790.1.mRNA1               27.0    0.84 
Erche07g026122.1.mRNA1.mrna1gene=Erche07g026122.1.mRNA1               27.0    0.84 
Erche06g019170.1.mRNA1.mrna1gene=Erche06g019170.1.mRNA1               27.0    0.84 
Erche04g026030.1.mRNA1.mrna1gene=Erche04g026030.1.mRNA1               27.0    0.84 
Erche01g015760.1.mRNA1.mrna1gene=Erche01g015760.1.mRNA1               27.0    0.84 
Erche01g015758.1.mRNA1.mrna1gene=Erche01g015758.1.mRNA1               27.0    0.84 
Erche01g021640.1.mRNA1.mrna1gene=Erche01g021640.1.mRNA1               27.0    0.84 


>Erche07g009500.1.mRNA1.mrna1 gene=Erche07g009500.1.mRNA1
Length=1488

 Score = 38.1 bits (20),  Expect = 4e-04
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1    TAGTGACTTCAAAGAGTTCT  20
            ||||||||||||||||||||
Sbjct  609  TAGTGACTTCAAAGAGTTCT  628


>Erche03g032390.1.mRNA1.mrna1 gene=Erche03g032390.1.mRNA1
Length=2571

 Score = 38.1 bits (20),  Expect = 4e-04
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1    TAGTGACTTCAAAGAGTTCT  20
            ||||||||||||||||||||
Sbjct  612  TAGTGACTTCAAAGAGTTCT  631


>Erche05g021880.1.mRNA1.mrna1 gene=Erche05g021880.1.mRNA1
Length=1383

 Score = 28.8 bits (15),  Expect = 0.23
 Identities = 15/15 (100%), Gaps = 0/15 (0%)
 Strand=Plus/Minus

Query  6     ACTTCAAAGAGTTCT  20
             |||||||||||||||
Sbjct  1316  ACTTCAAAGAGTTCT  1302


>Erche08g027080.1.mRNA1.mrna1 gene=Erche08g027080.1.mRNA1
Length=4224

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  7    CTTCAAAGAGTTCT  20
            ||||||||||||||
Sbjct  474  CTTCAAAGAGTTCT  461


>Erche08g029790.1.mRNA1.mrna1 gene=Erche08g029790.1.mRNA1
Length=4515

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  7     CTTCAAAGAGTTCT  20
             ||||||||||||||
Sbjct  2380  CTTCAAAGAGTTCT  2367


>Erche07g026122.1.mRNA1.mrna1 gene=Erche07g026122.1.mRNA1
Length=1227

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  4     TGACTTCAAAGAGT  17
             ||||||||||||||
Sbjct  1212  TGACTTCAAAGAGT  1225


>Erche06g019170.1.mRNA1.mrna1 gene=Erche06g019170.1.mRNA1
Length=2376

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  7     CTTCAAAGAGTTCT  20
             ||||||||||||||
Sbjct  1755  CTTCAAAGAGTTCT  1768


>Erche04g026030.1.mRNA1.mrna1 gene=Erche04g026030.1.mRNA1
Length=3075

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 17/18 (94%), Gaps = 1/18 (6%)
 Strand=Plus/Plus

Query  2     AGTGACTTCAAAGAGTTC  19
             ||| ||||||||||||||
Sbjct  1741  AGT-ACTTCAAAGAGTTC  1757


>Erche01g015760.1.mRNA1.mrna1 gene=Erche01g015760.1.mRNA1
Length=3012

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  7     CTTCAAAGAGTTCT  20
             ||||||||||||||
Sbjct  2285  CTTCAAAGAGTTCT  2298


>Erche01g015758.1.mRNA1.mrna1 gene=Erche01g015758.1.mRNA1
Length=3012

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  7     CTTCAAAGAGTTCT  20
             ||||||||||||||
Sbjct  2285  CTTCAAAGAGTTCT  2298


>Erche01g021640.1.mRNA1.mrna1 gene=Erche01g021640.1.mRNA1
Length=2925

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  2     AGTGACTTCAAAGA  15
             ||||||||||||||
Sbjct  1680  AGTGACTTCAAAGA  1667



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 111265965


  Database: Eche_v2.0_cds.fasta
    Posted date:  Jul 17, 2024  4:51 PM
  Number of letters in database: 37,600,338
  Number of sequences in database:  30,099



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5