BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Eche_v2.0_cds.fasta 30,099 sequences; 37,600,338 total letters Query= Untitled_sequence Length=20 Score E Sequences producing significant alignments: (Bits) Value Erche07g009480.1.mRNA1.mrna1gene=Erche07g009480.1.mRNA1 38.1 4e-04 Erche03g031840.1.mRNA1.mrna1gene=Erche03g031840.1.mRNA1 38.1 4e-04 Erche03g032030.1.mRNA1.mrna1gene=Erche03g032030.1.mRNA1 38.1 4e-04 Erche01g035760.1.mRNA1.mrna1gene=Erche01g035760.1.mRNA1 38.1 4e-04 Erche01g035790.1.mRNA1.mrna1gene=Erche01g035790.1.mRNA1 32.5 0.018 Erche01g038202.1.mRNA1.mrna1gene=Erche01g038202.1.mRNA1 28.8 0.23 Erche01g037115.1.mRNA1.mrna1gene=Erche01g037115.1.mRNA1 28.8 0.23 Erche01g037110.1.mRNA1.mrna1gene=Erche01g037110.1.mRNA1 28.8 0.23 Erche06g027930.1.mRNA1.mrna1gene=Erche06g027930.1.mRNA1 27.0 0.84 Erche06g018800.1.mRNA1.mrna1gene=Erche06g018800.1.mRNA1 27.0 0.84 Erche05g023110.1.mRNA1.mrna1gene=Erche05g023110.1.mRNA1 27.0 0.84 Erche03g029150.1.mRNA1.mrna1gene=Erche03g029150.1.mRNA1 27.0 0.84 Erche02g039960.1.mRNA1.mrna1gene=Erche02g039960.1.mRNA1 27.0 0.84 Erche01g035780.1.mRNA1.mrna1gene=Erche01g035780.1.mRNA1 27.0 0.84 >Erche07g009480.1.mRNA1.mrna1 gene=Erche07g009480.1.mRNA1 Length=8238 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 GAAAGAGTTCGTTGACGCAA 20 |||||||||||||||||||| Sbjct 4968 GAAAGAGTTCGTTGACGCAA 4987 Score = 27.0 bits (14), Expect = 0.84 Identities = 18/20 (90%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 GAAAGAGTTCGTTGACGCAA 20 |||||||||| | ||||||| Sbjct 3345 GAAAGAGTTCTTGGACGCAA 3364 >Erche03g031840.1.mRNA1.mrna1 gene=Erche03g031840.1.mRNA1 Length=1377 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 GAAAGAGTTCGTTGACGCAA 20 |||||||||||||||||||| Sbjct 555 GAAAGAGTTCGTTGACGCAA 574 >Erche03g032030.1.mRNA1.mrna1 gene=Erche03g032030.1.mRNA1 Length=666 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 GAAAGAGTTCGTTGACGCAA 20 |||||||||||||||||||| Sbjct 555 GAAAGAGTTCGTTGACGCAA 574 >Erche01g035760.1.mRNA1.mrna1 gene=Erche01g035760.1.mRNA1 Length=6111 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 GAAAGAGTTCGTTGACGCAA 20 |||||||||||||||||||| Sbjct 513 GAAAGAGTTCGTTGACGCAA 532 Score = 27.0 bits (14), Expect = 0.84 Identities = 18/20 (90%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 GAAAGAGTTCGTTGACGCAA 20 |||||||| | ||||||||| Sbjct 3294 GAAAGAGTACATTGACGCAA 3313 >Erche01g035790.1.mRNA1.mrna1 gene=Erche01g035790.1.mRNA1 Length=2337 Score = 32.5 bits (17), Expect = 0.018 Identities = 19/20 (95%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 GAAAGAGTTCGTTGACGCAA 20 |||||||||| ||||||||| Sbjct 1479 GAAAGAGTTCATTGACGCAA 1498 >Erche01g038202.1.mRNA1.mrna1 gene=Erche01g038202.1.mRNA1 Length=375 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 AAAGAGTTCGTTGACGCA 19 ||||||||||| |||||| Sbjct 232 AAAGAGTTCGTAGACGCA 249 >Erche01g037115.1.mRNA1.mrna1 gene=Erche01g037115.1.mRNA1 Length=375 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 AAAGAGTTCGTTGACGCA 19 ||||||||||| |||||| Sbjct 232 AAAGAGTTCGTAGACGCA 249 >Erche01g037110.1.mRNA1.mrna1 gene=Erche01g037110.1.mRNA1 Length=375 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 AAAGAGTTCGTTGACGCA 19 ||||||||||| |||||| Sbjct 232 AAAGAGTTCGTAGACGCA 249 >Erche06g027930.1.mRNA1.mrna1 gene=Erche06g027930.1.mRNA1 Length=1167 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Plus Query 2 AAAGAGTTCGTTGA 15 |||||||||||||| Sbjct 250 AAAGAGTTCGTTGA 263 >Erche06g018800.1.mRNA1.mrna1 gene=Erche06g018800.1.mRNA1 Length=1395 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Plus Query 2 AAAGAGTTCGTTGA 15 |||||||||||||| Sbjct 1228 AAAGAGTTCGTTGA 1241 >Erche05g023110.1.mRNA1.mrna1 gene=Erche05g023110.1.mRNA1 Length=1104 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Plus Query 1 GAAAGAGTTCGTTG 14 |||||||||||||| Sbjct 130 GAAAGAGTTCGTTG 143 >Erche03g029150.1.mRNA1.mrna1 gene=Erche03g029150.1.mRNA1 Length=2616 Score = 27.0 bits (14), Expect = 0.84 Identities = 18/20 (90%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 GAAAGAGTTCGTTGACGCAA 20 |||||||| | ||||||||| Sbjct 984 GAAAGAGTACATTGACGCAA 1003 >Erche02g039960.1.mRNA1.mrna1 gene=Erche02g039960.1.mRNA1 Length=1299 Score = 27.0 bits (14), Expect = 0.84 Identities = 16/17 (94%), Gaps = 0/17 (0%) Strand=Plus/Minus Query 2 AAAGAGTTCGTTGACGC 18 ||||||||||| ||||| Sbjct 23 AAAGAGTTCGTCGACGC 7 >Erche01g035780.1.mRNA1.mrna1 gene=Erche01g035780.1.mRNA1 Length=789 Score = 27.0 bits (14), Expect = 0.84 Identities = 18/20 (90%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 GAAAGAGTTCGTTGACGCAA 20 |||||||| | ||||||||| Sbjct 129 GAAAGAGTACATTGACGCAA 148 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 111265965 Database: Eche_v2.0_cds.fasta Posted date: Jul 17, 2024 4:51 PM Number of letters in database: 37,600,338 Number of sequences in database: 30,099 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5