BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Eche_v2.0_cds.fasta
           30,099 sequences; 37,600,338 total letters



Query= Untitled_sequence

Length=20
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Erche07g009480.1.mRNA1.mrna1gene=Erche07g009480.1.mRNA1               38.1    4e-04
Erche08g030630.1.mRNA1.mrna1gene=Erche08g030630.1.mRNA1               27.0    0.84 
Erche08g030940.1.mRNA1.mrna1gene=Erche08g030940.1.mRNA1               27.0    0.84 
Erche08g030960.1.mRNA1.mrna1gene=Erche08g030960.1.mRNA1               27.0    0.84 
Erche03g002820.1.mRNA1.mrna1gene=Erche03g002820.1.mRNA1               27.0    0.84 
Erche03g029150.1.mRNA1.mrna1gene=Erche03g029150.1.mRNA1               27.0    0.84 
Erche03g031840.1.mRNA1.mrna1gene=Erche03g031840.1.mRNA1               27.0    0.84 
Erche03g034130.1.mRNA1.mrna1gene=Erche03g034130.1.mRNA1               27.0    0.84 
Erche01g035760.1.mRNA1.mrna1gene=Erche01g035760.1.mRNA1               27.0    0.84 
Erche01g035790.1.mRNA1.mrna1gene=Erche01g035790.1.mRNA1               27.0    0.84 
Erche01g035910.1.mRNA1.mrna1gene=Erche01g035910.1.mRNA1               27.0    0.84 
Erche01g045765.1.mRNA1.mrna1gene=Erche01g045765.1.mRNA1               27.0    0.84 


>Erche07g009480.1.mRNA1.mrna1 gene=Erche07g009480.1.mRNA1
Length=8238

 Score = 38.1 bits (20),  Expect = 4e-04
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1     CAAAAAGGCTAGAGCGGATA  20
             ||||||||||||||||||||
Sbjct  5067  CAAAAAGGCTAGAGCGGATA  5086


>Erche08g030630.1.mRNA1.mrna1 gene=Erche08g030630.1.mRNA1
Length=8730

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  2     AAAAAGGCTAGAGC  15
             ||||||||||||||
Sbjct  4404  AAAAAGGCTAGAGC  4417


>Erche08g030940.1.mRNA1.mrna1 gene=Erche08g030940.1.mRNA1
Length=6753

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  2     AAAAAGGCTAGAGC  15
             ||||||||||||||
Sbjct  4323  AAAAAGGCTAGAGC  4336


>Erche08g030960.1.mRNA1.mrna1 gene=Erche08g030960.1.mRNA1
Length=5073

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  2    AAAAAGGCTAGAGC  15
            ||||||||||||||
Sbjct  825  AAAAAGGCTAGAGC  838


>Erche03g002820.1.mRNA1.mrna1 gene=Erche03g002820.1.mRNA1
Length=645

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 16/17 (94%), Gaps = 0/17 (0%)
 Strand=Plus/Plus

Query  4    AAAGGCTAGAGCGGATA  20
            |||||||||||| ||||
Sbjct  399  AAAGGCTAGAGCTGATA  415


>Erche03g029150.1.mRNA1.mrna1 gene=Erche03g029150.1.mRNA1
Length=2616

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 16/17 (94%), Gaps = 0/17 (0%)
 Strand=Plus/Plus

Query  1     CAAAAAGGCTAGAGCGG  17
             ||||||||||| |||||
Sbjct  1083  CAAAAAGGCTAAAGCGG  1099


>Erche03g031840.1.mRNA1.mrna1 gene=Erche03g031840.1.mRNA1
Length=1377

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 16/17 (94%), Gaps = 0/17 (0%)
 Strand=Plus/Plus

Query  1    CAAAAAGGCTAGAGCGG  17
            ||||||||||| |||||
Sbjct  654  CAAAAAGGCTAAAGCGG  670


>Erche03g034130.1.mRNA1.mrna1 gene=Erche03g034130.1.mRNA1
Length=1425

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 16/17 (94%), Gaps = 0/17 (0%)
 Strand=Plus/Plus

Query  1    CAAAAAGGCTAGAGCGG  17
            ||||||||||||| |||
Sbjct  654  CAAAAAGGCTAGAACGG  670


>Erche01g035760.1.mRNA1.mrna1 gene=Erche01g035760.1.mRNA1
Length=6111

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 16/17 (94%), Gaps = 0/17 (0%)
 Strand=Plus/Plus

Query  1    CAAAAAGGCTAGAGCGG  17
            ||||||||||| |||||
Sbjct  612  CAAAAAGGCTAAAGCGG  628


 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 16/17 (94%), Gaps = 0/17 (0%)
 Strand=Plus/Plus

Query  1     CAAAAAGGCTAGAGCGG  17
             ||||||||||| |||||
Sbjct  2139  CAAAAAGGCTAAAGCGG  2155


 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 16/17 (94%), Gaps = 0/17 (0%)
 Strand=Plus/Plus

Query  1     CAAAAAGGCTAGAGCGG  17
             ||||||||||| |||||
Sbjct  3393  CAAAAAGGCTAAAGCGG  3409


>Erche01g035790.1.mRNA1.mrna1 gene=Erche01g035790.1.mRNA1
Length=2337

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 16/17 (94%), Gaps = 0/17 (0%)
 Strand=Plus/Plus

Query  1     CAAAAAGGCTAGAGCGG  17
             ||||||||||| |||||
Sbjct  1578  CAAAAAGGCTAAAGCGG  1594


>Erche01g035910.1.mRNA1.mrna1 gene=Erche01g035910.1.mRNA1
Length=2535

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 16/17 (94%), Gaps = 0/17 (0%)
 Strand=Plus/Plus

Query  1    CAAAAAGGCTAGAGCGG  17
            ||||||||||| |||||
Sbjct  636  CAAAAAGGCTAAAGCGG  652


>Erche01g045765.1.mRNA1.mrna1 gene=Erche01g045765.1.mRNA1
Length=2925

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  2     AAAAAGGCTAGAGC  15
             ||||||||||||||
Sbjct  1527  AAAAAGGCTAGAGC  1540



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 111265965


  Database: Eche_v2.0_cds.fasta
    Posted date:  Jul 17, 2024  4:51 PM
  Number of letters in database: 37,600,338
  Number of sequences in database:  30,099



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5