BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Eche_v2.0_cds.fasta
           30,099 sequences; 37,600,338 total letters



Query= Untitled_sequence

Length=3675
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

ErcheCG001690.1.mRNA1.mrna1gene=ErcheCG001690.1.mRNA1                 976     0.0  


>ErcheCG001690.1.mRNA1.mrna1 gene=ErcheCG001690.1.mRNA1
Length=531

 Score = 976 bits (528),  Expect = 0.0
 Identities = 530/531 (99%), Gaps = 0/531 (0%)
 Strand=Plus/Minus

Query  1589  TTATTGACGAGCCACAGAGATTGCACCTATCAAAGCAACTAAAAGAATTATTGAAATGAG  1648
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  531   TTATTGACGAGCCACAGAGATTGCACCTATCAAAGCAACTAAAAGAATTATTGAAATGAG  472

Query  1649  TTCAAATGGCAGAAAAAAATCTGTTGATAAATGAATTCCTATTTGTTGACTATTACTTAT  1708
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  471   TTCAAATGGCAGAAAAAAATCTGTTGATAAATGAATTCCTATTTGTTGACTATTACTTAT  412

Query  1709  TAAATCTTGCTCTAGAATCTGGTTTAATCTTGTAGTCCAAATAACCCCGTACCATGACGT  1768
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  411   TAAATCTTGCTCTAGAATCTGGTTTAATCTTGTAGTCCAAATAACCCCGTACCATGACGT  352

Query  1769  ATCGAGAATAGTAGACATTAATAAAAAAAGAATAGTTGTACAAACCAACGAAGTAATCCC  1828
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  351   ATCGAGAATAGTAGACATTAATAAAAAAAGAATAGTTGTACAAACCAACGAAGTAATCCC  292

Query  1829  ATTCCCAACGGTCCACAGATTGAAATCTGTGGAATATTCTGACTCATTCATGAACATCAC  1888
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  291   ATTCCCAACGGTCCACAGATTGAAATCTGTGGAATATTCTGACTCATTCATGAACATCAC  232

Query  1889  AGCAAATATGATTAAAACATTTATGGCCCCCACGTAAATAAGGAGTTGTGCAGCAGCTAC  1948
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  231   AGCAAATATGATTAAAACATTTATGGCCCCCACGTAAATAAGGAGTTGTGCAGCAGCTAC  172

Query  1949  AAAATGGGAATTTGATAGAATATACAAGAAAGATATACAAACAAGAACAAATCCTAAGGA  2008
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  171   AAAATGGGAATTTGATAGAATATACAAGAAAGATATACAAACAAGAACAAATCCTAAGGA  112

Query  2009  AAAGGCTGAAAATATTGGGTTGGGAAGTAATACCACTCCCAGACCTCCTACTATAAGACC  2068
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  111   AAAGGCTGAAAATATTGGGTTGGGAAGTAATACCACTCCCAGACCTCCTACTATAAGACC  52

Query  2069  GGATCCCAGAAAAACTAAAAGAAAATCATGTATTGGTCCAGGCAAATCCAT  2119
             ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct  51    GGATCCCAGAAAAACGAAAAGAAAATCATGTATTGGTCCAGGCAAATCCAT  1



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 134201401920


  Database: Eche_v2.0_cds.fasta
    Posted date:  Jul 17, 2024  4:51 PM
  Number of letters in database: 37,600,338
  Number of sequences in database:  30,099



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5