BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Eche_v2.0_cds.fasta 30,099 sequences; 37,600,338 total letters Query= Untitled_sequence Length=20 Score E Sequences producing significant alignments: (Bits) Value Erche07g009500.1.mRNA1.mrna1gene=Erche07g009500.1.mRNA1 38.1 4e-04 Erche07g009480.1.mRNA1.mrna1gene=Erche07g009480.1.mRNA1 38.1 4e-04 Erche03g032390.1.mRNA1.mrna1gene=Erche03g032390.1.mRNA1 38.1 4e-04 Erche01g035760.1.mRNA1.mrna1gene=Erche01g035760.1.mRNA1 32.5 0.018 Erche03g034130.1.mRNA1.mrna1gene=Erche03g034130.1.mRNA1 30.7 0.065 Erche03g031840.1.mRNA1.mrna1gene=Erche03g031840.1.mRNA1 28.8 0.23 Erche03g032030.1.mRNA1.mrna1gene=Erche03g032030.1.mRNA1 28.8 0.23 Erche03g029150.1.mRNA1.mrna1gene=Erche03g029150.1.mRNA1 27.0 0.84 Erche01g024620.4.mRNA1.mrna1gene=Erche01g024620.4.mRNA1 27.0 0.84 Erche01g035790.1.mRNA1.mrna1gene=Erche01g035790.1.mRNA1 27.0 0.84 Erche01g035910.1.mRNA1.mrna1gene=Erche01g035910.1.mRNA1 27.0 0.84 Erche01g048220.1.mRNA1.mrna1gene=Erche01g048220.1.mRNA1 27.0 0.84 >Erche07g009500.1.mRNA1.mrna1 gene=Erche07g009500.1.mRNA1 Length=1488 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GATGGGCAAGCCAGACTCGA 20 |||||||||||||||||||| Sbjct 204 GATGGGCAAGCCAGACTCGA 185 >Erche07g009480.1.mRNA1.mrna1 gene=Erche07g009480.1.mRNA1 Length=8238 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GATGGGCAAGCCAGACTCGA 20 |||||||||||||||||||| Sbjct 123 GATGGGCAAGCCAGACTCGA 104 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GATGGGCAAGCCAGACTCGA 20 |||||||||||||||||||| Sbjct 1464 GATGGGCAAGCCAGACTCGA 1445 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GATGGGCAAGCCAGACTCGA 20 |||||||||||||||||||| Sbjct 6990 GATGGGCAAGCCAGACTCGA 6971 Score = 34.4 bits (18), Expect = 0.005 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 GATGGGCAAGCCAGACTC 18 |||||||||||||||||| Sbjct 2931 GATGGGCAAGCCAGACTC 2914 Score = 27.0 bits (14), Expect = 0.84 Identities = 18/20 (90%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GATGGGCAAGCCAGACTCGA 20 |||||||||||| |||| || Sbjct 4551 GATGGGCAAGCCGGACTGGA 4532 >Erche03g032390.1.mRNA1.mrna1 gene=Erche03g032390.1.mRNA1 Length=2571 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GATGGGCAAGCCAGACTCGA 20 |||||||||||||||||||| Sbjct 204 GATGGGCAAGCCAGACTCGA 185 >Erche01g035760.1.mRNA1.mrna1 gene=Erche01g035760.1.mRNA1 Length=6111 Score = 32.5 bits (17), Expect = 0.018 Identities = 19/20 (95%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GATGGGCAAGCCAGACTCGA 20 ||||||||||||||||| || Sbjct 4176 GATGGGCAAGCCAGACTGGA 4157 Score = 27.0 bits (14), Expect = 0.84 Identities = 18/20 (90%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GATGGGCAAGCCAGACTCGA 20 |||||||||||| |||| || Sbjct 1647 GATGGGCAAGCCGGACTGGA 1628 >Erche03g034130.1.mRNA1.mrna1 gene=Erche03g034130.1.mRNA1 Length=1425 Score = 30.7 bits (16), Expect = 0.065 Identities = 18/19 (95%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 GATGGGCAAGCCAGACTCG 19 |||||||||||| |||||| Sbjct 147 GATGGGCAAGCCGGACTCG 129 >Erche03g031840.1.mRNA1.mrna1 gene=Erche03g031840.1.mRNA1 Length=1377 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 GATGGGCAAGCCAGACTC 18 |||||||||||| ||||| Sbjct 147 GATGGGCAAGCCGGACTC 130 >Erche03g032030.1.mRNA1.mrna1 gene=Erche03g032030.1.mRNA1 Length=666 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 GATGGGCAAGCCAGACTC 18 |||||||||||| ||||| Sbjct 147 GATGGGCAAGCCGGACTC 130 >Erche03g029150.1.mRNA1.mrna1 gene=Erche03g029150.1.mRNA1 Length=2616 Score = 27.0 bits (14), Expect = 0.84 Identities = 18/20 (90%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GATGGGCAAGCCAGACTCGA 20 |||||||||||| |||| || Sbjct 594 GATGGGCAAGCCGGACTGGA 575 >Erche01g024620.4.mRNA1.mrna1 gene=Erche01g024620.4.mRNA1 Length=4863 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Plus Query 4 GGGCAAGCCAGACT 17 |||||||||||||| Sbjct 623 GGGCAAGCCAGACT 636 >Erche01g035790.1.mRNA1.mrna1 gene=Erche01g035790.1.mRNA1 Length=2337 Score = 27.0 bits (14), Expect = 0.84 Identities = 18/20 (90%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GATGGGCAAGCCAGACTCGA 20 |||||||||||| |||| || Sbjct 1077 GATGGGCAAGCCGGACTGGA 1058 >Erche01g035910.1.mRNA1.mrna1 gene=Erche01g035910.1.mRNA1 Length=2535 Score = 27.0 bits (14), Expect = 0.84 Identities = 18/20 (90%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GATGGGCAAGCCAGACTCGA 20 |||||||||||| |||| || Sbjct 147 GATGGGCAAGCCGGACTGGA 128 >Erche01g048220.1.mRNA1.mrna1 gene=Erche01g048220.1.mRNA1 Length=384 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Plus Query 2 ATGGGCAAGCCAGA 15 |||||||||||||| Sbjct 316 ATGGGCAAGCCAGA 329 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 111265965 Database: Eche_v2.0_cds.fasta Posted date: Jul 17, 2024 4:51 PM Number of letters in database: 37,600,338 Number of sequences in database: 30,099 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5