BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Eche_v2.0_cds.fasta 30,099 sequences; 37,600,338 total letters Query= Untitled_sequence Length=20 Score E Sequences producing significant alignments: (Bits) Value Erche07g009500.1.mRNA1.mrna1gene=Erche07g009500.1.mRNA1 38.1 4e-04 Erche07g009480.1.mRNA1.mrna1gene=Erche07g009480.1.mRNA1 38.1 4e-04 Erche03g029150.1.mRNA1.mrna1gene=Erche03g029150.1.mRNA1 38.1 4e-04 Erche03g031840.1.mRNA1.mrna1gene=Erche03g031840.1.mRNA1 38.1 4e-04 Erche03g032390.1.mRNA1.mrna1gene=Erche03g032390.1.mRNA1 38.1 4e-04 Erche03g034130.1.mRNA1.mrna1gene=Erche03g034130.1.mRNA1 38.1 4e-04 Erche01g035760.1.mRNA1.mrna1gene=Erche01g035760.1.mRNA1 38.1 4e-04 Erche01g035910.1.mRNA1.mrna1gene=Erche01g035910.1.mRNA1 38.1 4e-04 Erche01g035780.1.mRNA1.mrna1gene=Erche01g035780.1.mRNA1 36.2 0.001 Erche01g035790.1.mRNA1.mrna1gene=Erche01g035790.1.mRNA1 36.2 0.001 Erche06g031240.1.mRNA1.mrna1gene=Erche06g031240.1.mRNA1 28.8 0.23 Erche04g007620.1.mRNA1.mrna1gene=Erche04g007620.1.mRNA1 28.8 0.23 Erche08g002750.1.mRNA1.mrna1gene=Erche08g002750.1.mRNA1 27.0 0.84 Erche06g006470.1.mRNA1.mrna1gene=Erche06g006470.1.mRNA1 27.0 0.84 Erche05g013080.1.mRNA1.mrna1gene=Erche05g013080.1.mRNA1 27.0 0.84 Erche04g021730.1.mRNA1.mrna1gene=Erche04g021730.1.mRNA1 27.0 0.84 Erche01g006080.1.mRNA1.mrna1gene=Erche01g006080.1.mRNA1 27.0 0.84 >Erche07g009500.1.mRNA1.mrna1 gene=Erche07g009500.1.mRNA1 Length=1488 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GACCCAAATGAAAGGTCTTT 20 |||||||||||||||||||| Sbjct 966 GACCCAAATGAAAGGTCTTT 947 >Erche07g009480.1.mRNA1.mrna1 gene=Erche07g009480.1.mRNA1 Length=8238 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GACCCAAATGAAAGGTCTTT 20 |||||||||||||||||||| Sbjct 885 GACCCAAATGAAAGGTCTTT 866 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GACCCAAATGAAAGGTCTTT 20 |||||||||||||||||||| Sbjct 2226 GACCCAAATGAAAGGTCTTT 2207 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GACCCAAATGAAAGGTCTTT 20 |||||||||||||||||||| Sbjct 5316 GACCCAAATGAAAGGTCTTT 5297 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GACCCAAATGAAAGGTCTTT 20 |||||||||||||||||||| Sbjct 7752 GACCCAAATGAAAGGTCTTT 7733 Score = 27.0 bits (14), Expect = 0.84 Identities = 18/20 (90%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GACCCAAATGAAAGGTCTTT 20 ||||||||||||| ||||| Sbjct 3693 GACCCAAATGAAATTTCTTT 3674 >Erche03g029150.1.mRNA1.mrna1 gene=Erche03g029150.1.mRNA1 Length=2616 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GACCCAAATGAAAGGTCTTT 20 |||||||||||||||||||| Sbjct 1332 GACCCAAATGAAAGGTCTTT 1313 >Erche03g031840.1.mRNA1.mrna1 gene=Erche03g031840.1.mRNA1 Length=1377 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GACCCAAATGAAAGGTCTTT 20 |||||||||||||||||||| Sbjct 903 GACCCAAATGAAAGGTCTTT 884 >Erche03g032390.1.mRNA1.mrna1 gene=Erche03g032390.1.mRNA1 Length=2571 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GACCCAAATGAAAGGTCTTT 20 |||||||||||||||||||| Sbjct 969 GACCCAAATGAAAGGTCTTT 950 >Erche03g034130.1.mRNA1.mrna1 gene=Erche03g034130.1.mRNA1 Length=1425 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GACCCAAATGAAAGGTCTTT 20 |||||||||||||||||||| Sbjct 903 GACCCAAATGAAAGGTCTTT 884 >Erche01g035760.1.mRNA1.mrna1 gene=Erche01g035760.1.mRNA1 Length=6111 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GACCCAAATGAAAGGTCTTT 20 |||||||||||||||||||| Sbjct 861 GACCCAAATGAAAGGTCTTT 842 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GACCCAAATGAAAGGTCTTT 20 |||||||||||||||||||| Sbjct 3642 GACCCAAATGAAAGGTCTTT 3623 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GACCCAAATGAAAGGTCTTT 20 |||||||||||||||||||| Sbjct 4914 GACCCAAATGAAAGGTCTTT 4895 Score = 32.5 bits (17), Expect = 0.018 Identities = 19/20 (95%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GACCCAAATGAAAGGTCTTT 20 |||||| ||||||||||||| Sbjct 2388 GACCCACATGAAAGGTCTTT 2369 >Erche01g035910.1.mRNA1.mrna1 gene=Erche01g035910.1.mRNA1 Length=2535 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 GACCCAAATGAAAGGTCTTT 20 |||||||||||||||||||| Sbjct 855 GACCCAAATGAAAGGTCTTT 836 >Erche01g035780.1.mRNA1.mrna1 gene=Erche01g035780.1.mRNA1 Length=789 Score = 36.2 bits (19), Expect = 0.001 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 ACCCAAATGAAAGGTCTTT 20 ||||||||||||||||||| Sbjct 443 ACCCAAATGAAAGGTCTTT 425 >Erche01g035790.1.mRNA1.mrna1 gene=Erche01g035790.1.mRNA1 Length=2337 Score = 36.2 bits (19), Expect = 0.001 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 ACCCAAATGAAAGGTCTTT 20 ||||||||||||||||||| Sbjct 1826 ACCCAAATGAAAGGTCTTT 1808 >Erche06g031240.1.mRNA1.mrna1 gene=Erche06g031240.1.mRNA1 Length=4602 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 3 CCCAAATGAAAGGTCTTT 20 |||||||||||| ||||| Sbjct 3862 CCCAAATGAAAGCTCTTT 3845 >Erche04g007620.1.mRNA1.mrna1 gene=Erche04g007620.1.mRNA1 Length=4611 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 3 CCCAAATGAAAGGTCTTT 20 |||||||||||| ||||| Sbjct 3883 CCCAAATGAAAGCTCTTT 3866 >Erche08g002750.1.mRNA1.mrna1 gene=Erche08g002750.1.mRNA1 Length=588 Score = 27.0 bits (14), Expect = 0.84 Identities = 16/17 (94%), Gaps = 0/17 (0%) Strand=Plus/Plus Query 3 CCCAAATGAAAGGTCTT 19 |||||| |||||||||| Sbjct 443 CCCAAAGGAAAGGTCTT 459 >Erche06g006470.1.mRNA1.mrna1 gene=Erche06g006470.1.mRNA1 Length=1272 Score = 27.0 bits (14), Expect = 0.84 Identities = 16/17 (94%), Gaps = 0/17 (0%) Strand=Plus/Plus Query 3 CCCAAATGAAAGGTCTT 19 |||||| |||||||||| Sbjct 509 CCCAAAGGAAAGGTCTT 525 >Erche05g013080.1.mRNA1.mrna1 gene=Erche05g013080.1.mRNA1 Length=585 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Plus Query 4 CCAAATGAAAGGTC 17 |||||||||||||| Sbjct 531 CCAAATGAAAGGTC 544 >Erche04g021730.1.mRNA1.mrna1 gene=Erche04g021730.1.mRNA1 Length=1128 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Plus Query 2 ACCCAAATGAAAGG 15 |||||||||||||| Sbjct 841 ACCCAAATGAAAGG 854 >Erche01g006080.1.mRNA1.mrna1 gene=Erche01g006080.1.mRNA1 Length=4350 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Minus Query 7 AATGAAAGGTCTTT 20 |||||||||||||| Sbjct 562 AATGAAAGGTCTTT 549 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 111265965 Database: Eche_v2.0_cds.fasta Posted date: Jul 17, 2024 4:51 PM Number of letters in database: 37,600,338 Number of sequences in database: 30,099 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5