BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Eche_v2.0_cds.fasta 30,099 sequences; 37,600,338 total letters Query= Untitled_sequence Length=20 Score E Sequences producing significant alignments: (Bits) Value Erche07g009480.1.mRNA1.mrna1gene=Erche07g009480.1.mRNA1 38.1 4e-04 Erche03g031840.1.mRNA1.mrna1gene=Erche03g031840.1.mRNA1 38.1 4e-04 Erche03g032030.1.mRNA1.mrna1gene=Erche03g032030.1.mRNA1 38.1 4e-04 Erche01g035760.1.mRNA1.mrna1gene=Erche01g035760.1.mRNA1 32.5 0.018 Erche01g035790.1.mRNA1.mrna1gene=Erche01g035790.1.mRNA1 32.5 0.018 Erche01g035910.1.mRNA1.mrna1gene=Erche01g035910.1.mRNA1 30.7 0.065 Erche03g029150.1.mRNA1.mrna1gene=Erche03g029150.1.mRNA1 28.8 0.23 Erche08g020230.1.mRNA1.mrna1gene=Erche08g020230.1.mRNA1 27.0 0.84 Erche07g028410.1.mRNA1.mrna1gene=Erche07g028410.1.mRNA1 27.0 0.84 Erche04g003120.1.mRNA1.mrna1gene=Erche04g003120.1.mRNA1 27.0 0.84 Erche03g034130.1.mRNA1.mrna1gene=Erche03g034130.1.mRNA1 27.0 0.84 Erche02g044550.1.mRNA1.mrna1gene=Erche02g044550.1.mRNA1 27.0 0.84 Erche01g028960.1.mRNA1.mrna1gene=Erche01g028960.1.mRNA1 27.0 0.84 Erche01g033370.1.mRNA1.mrna1gene=Erche01g033370.1.mRNA1 27.0 0.84 >Erche07g009480.1.mRNA1.mrna1 gene=Erche07g009480.1.mRNA1 Length=8238 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TATCGACCATGGGGATCATG 20 |||||||||||||||||||| Sbjct 6877 TATCGACCATGGGGATCATG 6858 Score = 27.0 bits (14), Expect = 0.84 Identities = 18/20 (90%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TATCGACCATGGGGATCATG 20 |||| |||||||| |||||| Sbjct 1351 TATCAACCATGGGAATCATG 1332 >Erche03g031840.1.mRNA1.mrna1 gene=Erche03g031840.1.mRNA1 Length=1377 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TATCGACCATGGGGATCATG 20 |||||||||||||||||||| Sbjct 34 TATCGACCATGGGGATCATG 15 >Erche03g032030.1.mRNA1.mrna1 gene=Erche03g032030.1.mRNA1 Length=666 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TATCGACCATGGGGATCATG 20 |||||||||||||||||||| Sbjct 34 TATCGACCATGGGGATCATG 15 >Erche01g035760.1.mRNA1.mrna1 gene=Erche01g035760.1.mRNA1 Length=6111 Score = 32.5 bits (17), Expect = 0.018 Identities = 19/20 (95%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TATCGACCATGGGGATCATG 20 ||||||||||||||||| || Sbjct 1534 TATCGACCATGGGGATCGTG 1515 Score = 32.5 bits (17), Expect = 0.018 Identities = 19/20 (95%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TATCGACCATGGGGATCATG 20 ||||||||||||||||| || Sbjct 2791 TATCGACCATGGGGATCGTG 2772 Score = 32.5 bits (17), Expect = 0.018 Identities = 19/20 (95%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TATCGACCATGGGGATCATG 20 ||||||||||||||||| || Sbjct 5753 TATCGACCATGGGGATCGTG 5734 >Erche01g035790.1.mRNA1.mrna1 gene=Erche01g035790.1.mRNA1 Length=2337 Score = 32.5 bits (17), Expect = 0.018 Identities = 19/20 (95%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TATCGACCATGGGGATCATG 20 |||||||||| ||||||||| Sbjct 964 TATCGACCATTGGGATCATG 945 >Erche01g035910.1.mRNA1.mrna1 gene=Erche01g035910.1.mRNA1 Length=2535 Score = 30.7 bits (16), Expect = 0.065 Identities = 18/19 (95%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 ATCGACCATGGGGATCATG 20 |||||||||||||||| || Sbjct 33 ATCGACCATGGGGATCGTG 15 >Erche03g029150.1.mRNA1.mrna1 gene=Erche03g029150.1.mRNA1 Length=2616 Score = 28.8 bits (15), Expect = 0.23 Identities = 15/15 (100%), Gaps = 0/15 (0%) Strand=Plus/Minus Query 2 ATCGACCATGGGGAT 16 ||||||||||||||| Sbjct 480 ATCGACCATGGGGAT 466 >Erche08g020230.1.mRNA1.mrna1 gene=Erche08g020230.1.mRNA1 Length=1524 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Minus Query 3 TCGACCATGGGGAT 16 |||||||||||||| Sbjct 89 TCGACCATGGGGAT 76 >Erche07g028410.1.mRNA1.mrna1 gene=Erche07g028410.1.mRNA1 Length=342 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Minus Query 1 TATCGACCATGGGG 14 |||||||||||||| Sbjct 137 TATCGACCATGGGG 124 >Erche04g003120.1.mRNA1.mrna1 gene=Erche04g003120.1.mRNA1 Length=2100 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Minus Query 1 TATCGACCATGGGG 14 |||||||||||||| Sbjct 1895 TATCGACCATGGGG 1882 >Erche03g034130.1.mRNA1.mrna1 gene=Erche03g034130.1.mRNA1 Length=1425 Score = 27.0 bits (14), Expect = 0.84 Identities = 18/20 (90%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TATCGACCATGGGGATCATG 20 |||||| ||| ||||||||| Sbjct 34 TATCGATCATAGGGATCATG 15 >Erche02g044550.1.mRNA1.mrna1 gene=Erche02g044550.1.mRNA1 Length=1020 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Minus Query 3 TCGACCATGGGGAT 16 |||||||||||||| Sbjct 248 TCGACCATGGGGAT 235 >Erche01g028960.1.mRNA1.mrna1 gene=Erche01g028960.1.mRNA1 Length=2289 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Minus Query 4 CGACCATGGGGATC 17 |||||||||||||| Sbjct 749 CGACCATGGGGATC 736 >Erche01g033370.1.mRNA1.mrna1 gene=Erche01g033370.1.mRNA1 Length=2328 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Minus Query 1 TATCGACCATGGGG 14 |||||||||||||| Sbjct 1946 TATCGACCATGGGG 1933 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 111265965 Database: Eche_v2.0_cds.fasta Posted date: Jul 17, 2024 4:51 PM Number of letters in database: 37,600,338 Number of sequences in database: 30,099 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5