BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Eche_v2.0_cds.fasta 30,099 sequences; 37,600,338 total letters Query= Untitled_sequence Length=20 Score E Sequences producing significant alignments: (Bits) Value Erche07g009500.1.mRNA1.mrna1gene=Erche07g009500.1.mRNA1 38.1 4e-04 Erche07g009480.1.mRNA1.mrna1gene=Erche07g009480.1.mRNA1 38.1 4e-04 Erche03g032390.1.mRNA1.mrna1gene=Erche03g032390.1.mRNA1 38.1 4e-04 Erche07g013850.1.mRNA1.mrna1gene=Erche07g013850.1.mRNA1 28.8 0.23 Erche06g012950.1.mRNA1.mrna1gene=Erche06g012950.1.mRNA1 28.8 0.23 Erche04g003370.1.mRNA1.mrna1gene=Erche04g003370.1.mRNA1 28.8 0.23 Erche04g003259.1.mRNA1.mrna1gene=Erche04g003259.1.mRNA1 28.8 0.23 Erche02g009920.1.mRNA1.mrna1gene=Erche02g009920.1.mRNA1 28.8 0.23 Erche01g017470.1.mRNA1.mrna1gene=Erche01g017470.1.mRNA1 28.8 0.23 Erche08g020250.1.mRNA1.mrna1gene=Erche08g020250.1.mRNA1 27.0 0.84 Erche07g019770.1.mRNA1.mrna1gene=Erche07g019770.1.mRNA1 27.0 0.84 Erche07g026130.1.mRNA1.mrna1gene=Erche07g026130.1.mRNA1 27.0 0.84 Erche06g015800.1.mRNA1.mrna1gene=Erche06g015800.1.mRNA1 27.0 0.84 Erche06g026160.1.mRNA1.mrna1gene=Erche06g026160.1.mRNA1 27.0 0.84 Erche04g013170.1.mRNA1.mrna1gene=Erche04g013170.1.mRNA1 27.0 0.84 Erche04g031490.1.mRNA1.mrna1gene=Erche04g031490.1.mRNA1 27.0 0.84 Erche02g023500.1.mRNA1.mrna1gene=Erche02g023500.1.mRNA1 27.0 0.84 Erche01g017980.1.mRNA1.mrna1gene=Erche01g017980.1.mRNA1 27.0 0.84 >Erche07g009500.1.mRNA1.mrna1 gene=Erche07g009500.1.mRNA1 Length=1488 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 AAGTTTCCATATCAAGAAGC 20 |||||||||||||||||||| Sbjct 220 AAGTTTCCATATCAAGAAGC 239 >Erche07g009480.1.mRNA1.mrna1 gene=Erche07g009480.1.mRNA1 Length=8238 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 AAGTTTCCATATCAAGAAGC 20 |||||||||||||||||||| Sbjct 139 AAGTTTCCATATCAAGAAGC 158 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 AAGTTTCCATATCAAGAAGC 20 |||||||||||||||||||| Sbjct 7006 AAGTTTCCATATCAAGAAGC 7025 Score = 36.2 bits (19), Expect = 0.001 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 AAGTTTCCATATCAAGAAG 19 ||||||||||||||||||| Sbjct 1480 AAGTTTCCATATCAAGAAG 1498 Score = 32.5 bits (17), Expect = 0.018 Identities = 19/20 (95%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 AAGTTTCCATATCAAGAAGC 20 |||||||||||||| ||||| Sbjct 2947 AAGTTTCCATATCATGAAGC 2966 >Erche03g032390.1.mRNA1.mrna1 gene=Erche03g032390.1.mRNA1 Length=2571 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 AAGTTTCCATATCAAGAAGC 20 |||||||||||||||||||| Sbjct 220 AAGTTTCCATATCAAGAAGC 239 >Erche07g013850.1.mRNA1.mrna1 gene=Erche07g013850.1.mRNA1 Length=1736 Score = 28.8 bits (15), Expect = 0.23 Identities = 15/15 (100%), Gaps = 0/15 (0%) Strand=Plus/Plus Query 4 TTTCCATATCAAGAA 18 ||||||||||||||| Sbjct 1411 TTTCCATATCAAGAA 1425 >Erche06g012950.1.mRNA1.mrna1 gene=Erche06g012950.1.mRNA1 Length=978 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 AAGTTTCCATATCAAGAA 18 |||||||||| ||||||| Sbjct 776 AAGTTTCCATTTCAAGAA 793 >Erche04g003370.1.mRNA1.mrna1 gene=Erche04g003370.1.mRNA1 Length=1452 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 AGTTTCCATATCAAGAAG 19 |||||||||||| ||||| Sbjct 190 AGTTTCCATATCCAGAAG 173 >Erche04g003259.1.mRNA1.mrna1 gene=Erche04g003259.1.mRNA1 Length=1452 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 AGTTTCCATATCAAGAAG 19 |||||||||||| ||||| Sbjct 190 AGTTTCCATATCCAGAAG 173 >Erche02g009920.1.mRNA1.mrna1 gene=Erche02g009920.1.mRNA1 Length=1302 Score = 28.8 bits (15), Expect = 0.23 Identities = 15/15 (100%), Gaps = 0/15 (0%) Strand=Plus/Plus Query 6 TCCATATCAAGAAGC 20 ||||||||||||||| Sbjct 822 TCCATATCAAGAAGC 836 >Erche01g017470.1.mRNA1.mrna1 gene=Erche01g017470.1.mRNA1 Length=6567 Score = 28.8 bits (15), Expect = 0.23 Identities = 15/15 (100%), Gaps = 0/15 (0%) Strand=Plus/Minus Query 1 AAGTTTCCATATCAA 15 ||||||||||||||| Sbjct 1642 AAGTTTCCATATCAA 1628 >Erche08g020250.1.mRNA1.mrna1 gene=Erche08g020250.1.mRNA1 Length=2991 Score = 27.0 bits (14), Expect = 0.84 Identities = 18/20 (90%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 AAGTTTCCATATCAAGAAGC 20 |||||||||| |||| |||| Sbjct 1798 AAGTTTCCATCTCAACAAGC 1817 >Erche07g019770.1.mRNA1.mrna1 gene=Erche07g019770.1.mRNA1 Length=2973 Score = 27.0 bits (14), Expect = 0.84 Identities = 18/20 (90%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 AAGTTTCCATATCAAGAAGC 20 ||||||||| ||||| |||| Sbjct 1978 AAGTTTCCACATCAAAAAGC 1959 >Erche07g026130.1.mRNA1.mrna1 gene=Erche07g026130.1.mRNA1 Length=7671 Score = 27.0 bits (14), Expect = 0.84 Identities = 17/18 (94%), Gaps = 1/18 (6%) Strand=Plus/Minus Query 1 AAGTTTCCATATCAAGAA 18 |||||||||||||| ||| Sbjct 1252 AAGTTTCCATATCA-GAA 1236 >Erche06g015800.1.mRNA1.mrna1 gene=Erche06g015800.1.mRNA1 Length=1332 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Plus Query 7 CCATATCAAGAAGC 20 |||||||||||||| Sbjct 816 CCATATCAAGAAGC 829 >Erche06g026160.1.mRNA1.mrna1 gene=Erche06g026160.1.mRNA1 Length=609 Score = 27.0 bits (14), Expect = 0.84 Identities = 18/20 (90%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 AAGTTTCCATATCAAGAAGC 20 ||| ||| |||||||||||| Sbjct 546 AAGATTCAATATCAAGAAGC 565 >Erche04g013170.1.mRNA1.mrna1 gene=Erche04g013170.1.mRNA1 Length=348 Score = 27.0 bits (14), Expect = 0.84 Identities = 16/17 (94%), Gaps = 0/17 (0%) Strand=Plus/Plus Query 4 TTTCCATATCAAGAAGC 20 ||||||||| ||||||| Sbjct 156 TTTCCATATGAAGAAGC 172 >Erche04g031490.1.mRNA1.mrna1 gene=Erche04g031490.1.mRNA1 Length=1200 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Minus Query 5 TTCCATATCAAGAA 18 |||||||||||||| Sbjct 971 TTCCATATCAAGAA 958 >Erche02g023500.1.mRNA1.mrna1 gene=Erche02g023500.1.mRNA1 Length=3756 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Minus Query 7 CCATATCAAGAAGC 20 |||||||||||||| Sbjct 955 CCATATCAAGAAGC 942 >Erche01g017980.1.mRNA1.mrna1 gene=Erche01g017980.1.mRNA1 Length=1203 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Minus Query 5 TTCCATATCAAGAA 18 |||||||||||||| Sbjct 977 TTCCATATCAAGAA 964 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 111265965 Database: Eche_v2.0_cds.fasta Posted date: Jul 17, 2024 4:51 PM Number of letters in database: 37,600,338 Number of sequences in database: 30,099 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5