BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Erysimum V2.0 CDS 30,099 sequences; 37,600,338 total letters Query= Untitled_sequence Length=20 Score E Sequences producing significant alignments: (Bits) Value Erche06g023060.1.mRNA1.mrna1gene=Erche06g023060.1.mRNA1 38.1 4e-04 Erche05g030550.1.mRNA1.mrna1gene=Erche05g030550.1.mRNA1 38.1 4e-04 Erche04g006780.1.mRNA1.mrna1gene=Erche04g006780.1.mRNA1 38.1 4e-04 Erche04g006910.1.mRNA1.mrna1gene=Erche04g006910.1.mRNA1 38.1 4e-04 Erche04g006870.1.mRNA1.mrna1gene=Erche04g006870.1.mRNA1 32.5 0.018 Erche04g004640.1.mRNA1.mrna1gene=Erche04g004640.1.mRNA1 30.7 0.065 Erche03g024734.1.mRNA1.mrna1gene=Erche03g024734.1.mRNA1 30.7 0.065 Erche03g023090.1.mRNA1.mrna1gene=Erche03g023090.1.mRNA1 30.7 0.065 Erche08g025000.1.mRNA1.mrna1gene=Erche08g025000.1.mRNA1 28.8 0.23 Erche02g027360.1.mRNA1.mrna1gene=Erche02g027360.1.mRNA1 28.8 0.23 Erche07g004900.1.mRNA1.mrna1gene=Erche07g004900.1.mRNA1 27.0 0.84 Erche05g033740.1.mRNA1.mrna1gene=Erche05g033740.1.mRNA1 27.0 0.84 Erche05g014410.1.mRNA1.mrna1gene=Erche05g014410.1.mRNA1 27.0 0.84 Erche04g004630.1.mRNA1.mrna1gene=Erche04g004630.1.mRNA1 27.0 0.84 Erche04g004770.1.mRNA1.mrna1gene=Erche04g004770.1.mRNA1 27.0 0.84 Erche04g014450.1.mRNA1.mrna1gene=Erche04g014450.1.mRNA1 27.0 0.84 Erche04g026660.1.mRNA1.mrna1gene=Erche04g026660.1.mRNA1 27.0 0.84 Erche02g027390.1.mRNA1.mrna1gene=Erche02g027390.1.mRNA1 27.0 0.84 Erche02g027380.1.mRNA1.mrna1gene=Erche02g027380.1.mRNA1 27.0 0.84 >Erche06g023060.1.mRNA1.mrna1 gene=Erche06g023060.1.mRNA1 Length=1098 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TCTATTGAAACATATATCGT 20 |||||||||||||||||||| Sbjct 652 TCTATTGAAACATATATCGT 671 >Erche05g030550.1.mRNA1.mrna1 gene=Erche05g030550.1.mRNA1 Length=873 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TCTATTGAAACATATATCGT 20 |||||||||||||||||||| Sbjct 652 TCTATTGAAACATATATCGT 671 >Erche04g006780.1.mRNA1.mrna1 gene=Erche04g006780.1.mRNA1 Length=1818 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TCTATTGAAACATATATCGT 20 |||||||||||||||||||| Sbjct 652 TCTATTGAAACATATATCGT 671 >Erche04g006910.1.mRNA1.mrna1 gene=Erche04g006910.1.mRNA1 Length=2280 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TCTATTGAAACATATATCGT 20 |||||||||||||||||||| Sbjct 1831 TCTATTGAAACATATATCGT 1850 Score = 27.0 bits (14), Expect = 0.84 Identities = 18/20 (90%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TCTATTGAAACATATATCGT 20 |||| | ||||||||||||| Sbjct 526 TCTACTCAAACATATATCGT 545 >Erche04g006870.1.mRNA1.mrna1 gene=Erche04g006870.1.mRNA1 Length=2760 Score = 32.5 bits (17), Expect = 0.018 Identities = 17/17 (100%), Gaps = 0/17 (0%) Strand=Plus/Plus Query 1 TCTATTGAAACATATAT 17 ||||||||||||||||| Sbjct 541 TCTATTGAAACATATAT 557 Score = 27.0 bits (14), Expect = 0.84 Identities = 16/17 (94%), Gaps = 0/17 (0%) Strand=Plus/Plus Query 1 TCTATTGAAACATATAT 17 |||||||| |||||||| Sbjct 1936 TCTATTGACACATATAT 1952 >Erche04g004640.1.mRNA1.mrna1 gene=Erche04g004640.1.mRNA1 Length=7620 Score = 30.7 bits (16), Expect = 0.065 Identities = 16/16 (100%), Gaps = 0/16 (0%) Strand=Plus/Plus Query 2 CTATTGAAACATATAT 17 |||||||||||||||| Sbjct 4589 CTATTGAAACATATAT 4604 >Erche03g024734.1.mRNA1.mrna1 gene=Erche03g024734.1.mRNA1 Length=1587 Score = 30.7 bits (16), Expect = 0.065 Identities = 16/16 (100%), Gaps = 0/16 (0%) Strand=Plus/Plus Query 1 TCTATTGAAACATATA 16 |||||||||||||||| Sbjct 582 TCTATTGAAACATATA 597 >Erche03g023090.1.mRNA1.mrna1 gene=Erche03g023090.1.mRNA1 Length=1662 Score = 30.7 bits (16), Expect = 0.065 Identities = 16/16 (100%), Gaps = 0/16 (0%) Strand=Plus/Plus Query 1 TCTATTGAAACATATA 16 |||||||||||||||| Sbjct 555 TCTATTGAAACATATA 570 >Erche08g025000.1.mRNA1.mrna1 gene=Erche08g025000.1.mRNA1 Length=753 Score = 28.8 bits (15), Expect = 0.23 Identities = 15/15 (100%), Gaps = 0/15 (0%) Strand=Plus/Plus Query 1 TCTATTGAAACATAT 15 ||||||||||||||| Sbjct 705 TCTATTGAAACATAT 719 >Erche02g027360.1.mRNA1.mrna1 gene=Erche02g027360.1.mRNA1 Length=3678 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TCTATTGAAACATATATC 18 ||| |||||||||||||| Sbjct 857 TCTCTTGAAACATATATC 840 Score = 27.0 bits (14), Expect = 0.84 Identities = 16/17 (94%), Gaps = 0/17 (0%) Strand=Plus/Minus Query 1 TCTATTGAAACATATAT 17 ||| ||||||||||||| Sbjct 3053 TCTCTTGAAACATATAT 3037 >Erche07g004900.1.mRNA1.mrna1 gene=Erche07g004900.1.mRNA1 Length=3201 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Minus Query 5 TTGAAACATATATC 18 |||||||||||||| Sbjct 557 TTGAAACATATATC 544 >Erche05g033740.1.mRNA1.mrna1 gene=Erche05g033740.1.mRNA1 Length=1404 Score = 27.0 bits (14), Expect = 0.84 Identities = 18/20 (90%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TCTATTGAAACATATATCGT 20 |||| |||| |||||||||| Sbjct 646 TCTACTGAACCATATATCGT 665 >Erche05g014410.1.mRNA1.mrna1 gene=Erche05g014410.1.mRNA1 Length=5004 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Plus Query 2 CTATTGAAACATAT 15 |||||||||||||| Sbjct 1936 CTATTGAAACATAT 1949 >Erche04g004630.1.mRNA1.mrna1 gene=Erche04g004630.1.mRNA1 Length=9540 Score = 27.0 bits (14), Expect = 0.84 Identities = 16/17 (94%), Gaps = 0/17 (0%) Strand=Plus/Plus Query 1 TCTATTGAAACATATAT 17 ||||||||||||| ||| Sbjct 9133 TCTATTGAAACATTTAT 9149 >Erche04g004770.1.mRNA1.mrna1 gene=Erche04g004770.1.mRNA1 Length=4146 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Minus Query 5 TTGAAACATATATC 18 |||||||||||||| Sbjct 410 TTGAAACATATATC 397 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Minus Query 5 TTGAAACATATATC 18 |||||||||||||| Sbjct 1790 TTGAAACATATATC 1777 >Erche04g014450.1.mRNA1.mrna1 gene=Erche04g014450.1.mRNA1 Length=1470 Score = 27.0 bits (14), Expect = 0.84 Identities = 18/20 (90%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TCTATTGAAACATATATCGT 20 || |||||||||||| |||| Sbjct 652 TCCATTGAAACATATCTCGT 671 >Erche04g026660.1.mRNA1.mrna1 gene=Erche04g026660.1.mRNA1 Length=1665 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Plus Query 2 CTATTGAAACATAT 15 |||||||||||||| Sbjct 1540 CTATTGAAACATAT 1553 >Erche02g027390.1.mRNA1.mrna1 gene=Erche02g027390.1.mRNA1 Length=3030 Score = 27.0 bits (14), Expect = 0.84 Identities = 16/17 (94%), Gaps = 0/17 (0%) Strand=Plus/Minus Query 1 TCTATTGAAACATATAT 17 ||| ||||||||||||| Sbjct 1568 TCTCTTGAAACATATAT 1552 >Erche02g027380.1.mRNA1.mrna1 gene=Erche02g027380.1.mRNA1 Length=2232 Score = 27.0 bits (14), Expect = 0.84 Identities = 16/17 (94%), Gaps = 0/17 (0%) Strand=Plus/Minus Query 1 TCTATTGAAACATATAT 17 ||| ||||||||||||| Sbjct 1685 TCTCTTGAAACATATAT 1669 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 111265965 Database: Erysimum V2.0 CDS Posted date: Oct 20, 2020 1:06 PM Number of letters in database: 37,600,338 Number of sequences in database: 30,099 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5