BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Eche_v2.0_cds.fasta 30,099 sequences; 37,600,338 total letters Query= Untitled_sequence Length=20 Score E Sequences producing significant alignments: (Bits) Value Erche03g031840.1.mRNA1.mrna1gene=Erche03g031840.1.mRNA1 36.2 0.001 Erche03g032030.1.mRNA1.mrna1gene=Erche03g032030.1.mRNA1 36.2 0.001 Erche01g035760.1.mRNA1.mrna1gene=Erche01g035760.1.mRNA1 36.2 0.001 Erche07g009480.1.mRNA1.mrna1gene=Erche07g009480.1.mRNA1 30.7 0.065 Erche03g029150.1.mRNA1.mrna1gene=Erche03g029150.1.mRNA1 30.7 0.065 Erche01g035910.1.mRNA1.mrna1gene=Erche01g035910.1.mRNA1 30.7 0.065 Erche01g045170.1.mRNA1.mrna1gene=Erche01g045170.1.mRNA1 30.7 0.065 Erche03g034130.1.mRNA1.mrna1gene=Erche03g034130.1.mRNA1 28.8 0.23 Erche01g035790.1.mRNA1.mrna1gene=Erche01g035790.1.mRNA1 28.8 0.23 Erche07g028410.1.mRNA1.mrna1gene=Erche07g028410.1.mRNA1 27.0 0.84 Erche04g003120.1.mRNA1.mrna1gene=Erche04g003120.1.mRNA1 27.0 0.84 Erche03g009210.1.mRNA1.mrna1gene=Erche03g009210.1.mRNA1 27.0 0.84 Erche01g033370.1.mRNA1.mrna1gene=Erche01g033370.1.mRNA1 27.0 0.84 >Erche03g031840.1.mRNA1.mrna1 gene=Erche03g031840.1.mRNA1 Length=1377 Score = 36.2 bits (19), Expect = 0.001 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 CCTTGAAATATCGACCATG 20 ||||||||||||||||||| Sbjct 42 CCTTGAAATATCGACCATG 24 >Erche03g032030.1.mRNA1.mrna1 gene=Erche03g032030.1.mRNA1 Length=666 Score = 36.2 bits (19), Expect = 0.001 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 CCTTGAAATATCGACCATG 20 ||||||||||||||||||| Sbjct 42 CCTTGAAATATCGACCATG 24 >Erche01g035760.1.mRNA1.mrna1 gene=Erche01g035760.1.mRNA1 Length=6111 Score = 36.2 bits (19), Expect = 0.001 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 CCTTGAAATATCGACCATG 20 ||||||||||||||||||| Sbjct 1542 CCTTGAAATATCGACCATG 1524 Score = 36.2 bits (19), Expect = 0.001 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 CCTTGAAATATCGACCATG 20 ||||||||||||||||||| Sbjct 2799 CCTTGAAATATCGACCATG 2781 Score = 36.2 bits (19), Expect = 0.001 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 CCTTGAAATATCGACCATG 20 ||||||||||||||||||| Sbjct 5761 CCTTGAAATATCGACCATG 5743 Score = 34.4 bits (18), Expect = 0.005 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 CCTTGAAATATCGACCAT 19 |||||||||||||||||| Sbjct 18 CCTTGAAATATCGACCAT 1 >Erche07g009480.1.mRNA1.mrna1 gene=Erche07g009480.1.mRNA1 Length=8238 Score = 30.7 bits (16), Expect = 0.065 Identities = 18/19 (95%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 CCTTGAAATATCGACCATG 20 ||||| ||||||||||||| Sbjct 6885 CCTTGCAATATCGACCATG 6867 >Erche03g029150.1.mRNA1.mrna1 gene=Erche03g029150.1.mRNA1 Length=2616 Score = 30.7 bits (16), Expect = 0.065 Identities = 18/19 (95%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 CCTTGAAATATCGACCATG 20 |||||||| |||||||||| Sbjct 489 CCTTGAAAGATCGACCATG 471 >Erche01g035910.1.mRNA1.mrna1 gene=Erche01g035910.1.mRNA1 Length=2535 Score = 30.7 bits (16), Expect = 0.065 Identities = 18/19 (95%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 CCTTGAAATATCGACCATG 20 |||||||| |||||||||| Sbjct 42 CCTTGAAACATCGACCATG 24 >Erche01g045170.1.mRNA1.mrna1 gene=Erche01g045170.1.mRNA1 Length=4521 Score = 30.7 bits (16), Expect = 0.065 Identities = 16/16 (100%), Gaps = 0/16 (0%) Strand=Plus/Minus Query 5 TGAAATATCGACCATG 20 |||||||||||||||| Sbjct 2203 TGAAATATCGACCATG 2188 >Erche03g034130.1.mRNA1.mrna1 gene=Erche03g034130.1.mRNA1 Length=1425 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 CCTTGAAATATCGACCAT 19 |||||||||||||| ||| Sbjct 42 CCTTGAAATATCGATCAT 25 >Erche01g035790.1.mRNA1.mrna1 gene=Erche01g035790.1.mRNA1 Length=2337 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 CCTTGAAATATCGACCAT 19 |||||| ||||||||||| Sbjct 972 CCTTGATATATCGACCAT 955 >Erche07g028410.1.mRNA1.mrna1 gene=Erche07g028410.1.mRNA1 Length=342 Score = 27.0 bits (14), Expect = 0.84 Identities = 17/18 (94%), Gaps = 1/18 (6%) Strand=Plus/Minus Query 3 CTTGAAATATCGACCATG 20 ||| |||||||||||||| Sbjct 143 CTT-AAATATCGACCATG 127 >Erche04g003120.1.mRNA1.mrna1 gene=Erche04g003120.1.mRNA1 Length=2100 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Minus Query 7 AAATATCGACCATG 20 |||||||||||||| Sbjct 1898 AAATATCGACCATG 1885 >Erche03g009210.1.mRNA1.mrna1 gene=Erche03g009210.1.mRNA1 Length=1659 Score = 27.0 bits (14), Expect = 0.84 Identities = 17/18 (94%), Gaps = 1/18 (6%) Strand=Plus/Minus Query 4 TTG-AAATATCGACCATG 20 ||| |||||||||||||| Sbjct 1100 TTGCAAATATCGACCATG 1083 >Erche01g033370.1.mRNA1.mrna1 gene=Erche01g033370.1.mRNA1 Length=2328 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Minus Query 7 AAATATCGACCATG 20 |||||||||||||| Sbjct 1949 AAATATCGACCATG 1936 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 111265965 Database: Eche_v2.0_cds.fasta Posted date: Jul 17, 2024 4:51 PM Number of letters in database: 37,600,338 Number of sequences in database: 30,099 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5