BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Eche_v2.0_cds.fasta
           30,099 sequences; 37,600,338 total letters



Query= Untitled_sequence

Length=20
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Erche07g009500.1.mRNA1.mrna1gene=Erche07g009500.1.mRNA1               38.1    4e-04
Erche07g009480.1.mRNA1.mrna1gene=Erche07g009480.1.mRNA1               38.1    4e-04
Erche03g032390.1.mRNA1.mrna1gene=Erche03g032390.1.mRNA1               38.1    4e-04
Erche01g004600.1.mRNA1.mrna1gene=Erche01g004600.1.mRNA1               30.7    0.065
Erche08g027270.1.mRNA1.mrna1gene=Erche08g027270.1.mRNA1               28.8    0.23 
Erche08g030870.1.mRNA1.mrna1gene=Erche08g030870.1.mRNA1               27.0    0.84 
Erche04g001580.1.mRNA1.mrna1gene=Erche04g001580.1.mRNA1               27.0    0.84 
Erche03g014760.1.mRNA1.mrna1gene=Erche03g014760.1.mRNA1               27.0    0.84 
Erche03g014805.1.mRNA1.mrna1gene=Erche03g014805.1.mRNA1               27.0    0.84 
Erche01g014930.1.mRNA1.mrna1gene=Erche01g014930.1.mRNA1               27.0    0.84 
Erche01g048640.1.mRNA1.mrna1gene=Erche01g048640.1.mRNA1               27.0    0.84 


>Erche07g009500.1.mRNA1.mrna1 gene=Erche07g009500.1.mRNA1
Length=1488

 Score = 38.1 bits (20),  Expect = 4e-04
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  1    AACAATGAAATGCTCCTTAT  20
            ||||||||||||||||||||
Sbjct  546  AACAATGAAATGCTCCTTAT  527


>Erche07g009480.1.mRNA1.mrna1 gene=Erche07g009480.1.mRNA1
Length=8238

 Score = 38.1 bits (20),  Expect = 4e-04
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  1    AACAATGAAATGCTCCTTAT  20
            ||||||||||||||||||||
Sbjct  465  AACAATGAAATGCTCCTTAT  446


 Score = 38.1 bits (20),  Expect = 4e-04
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  1     AACAATGAAATGCTCCTTAT  20
             ||||||||||||||||||||
Sbjct  7332  AACAATGAAATGCTCCTTAT  7313


>Erche03g032390.1.mRNA1.mrna1 gene=Erche03g032390.1.mRNA1
Length=2571

 Score = 38.1 bits (20),  Expect = 4e-04
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  1    AACAATGAAATGCTCCTTAT  20
            ||||||||||||||||||||
Sbjct  549  AACAATGAAATGCTCCTTAT  530


>Erche01g004600.1.mRNA1.mrna1 gene=Erche01g004600.1.mRNA1
Length=3189

 Score = 30.7 bits (16),  Expect = 0.065
 Identities = 16/16 (100%), Gaps = 0/16 (0%)
 Strand=Plus/Plus

Query  1     AACAATGAAATGCTCC  16
             ||||||||||||||||
Sbjct  2509  AACAATGAAATGCTCC  2524


>Erche08g027270.1.mRNA1.mrna1 gene=Erche08g027270.1.mRNA1
Length=1920

 Score = 28.8 bits (15),  Expect = 0.23
 Identities = 17/18 (94%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  2    ACAATGAAATGCTCCTTA  19
            |||| |||||||||||||
Sbjct  633  ACAAGGAAATGCTCCTTA  650


>Erche08g030870.1.mRNA1.mrna1 gene=Erche08g030870.1.mRNA1
Length=1032

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 16/17 (94%), Gaps = 0/17 (0%)
 Strand=Plus/Minus

Query  1    AACAATGAAATGCTCCT  17
            |||||||||| ||||||
Sbjct  909  AACAATGAAAGGCTCCT  893


>Erche04g001580.1.mRNA1.mrna1 gene=Erche04g001580.1.mRNA1
Length=2850

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  7     GAAATGCTCCTTAT  20
             ||||||||||||||
Sbjct  2847  GAAATGCTCCTTAT  2834


>Erche03g014760.1.mRNA1.mrna1 gene=Erche03g014760.1.mRNA1
Length=1632

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  1     AACAATGAAATGCT  14
             ||||||||||||||
Sbjct  1203  AACAATGAAATGCT  1216


>Erche03g014805.1.mRNA1.mrna1 gene=Erche03g014805.1.mRNA1
Length=1032

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  1    AACAATGAAATGCT  14
            ||||||||||||||
Sbjct  642  AACAATGAAATGCT  655


>Erche01g014930.1.mRNA1.mrna1 gene=Erche01g014930.1.mRNA1
Length=2763

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  7     GAAATGCTCCTTAT  20
             ||||||||||||||
Sbjct  2760  GAAATGCTCCTTAT  2747


>Erche01g048640.1.mRNA1.mrna1 gene=Erche01g048640.1.mRNA1
Length=675

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 16/17 (94%), Gaps = 0/17 (0%)
 Strand=Plus/Minus

Query  2    ACAATGAAATGCTCCTT  18
            ||||||| |||||||||
Sbjct  131  ACAATGAGATGCTCCTT  115



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 111265965


  Database: Eche_v2.0_cds.fasta
    Posted date:  Jul 17, 2024  4:51 PM
  Number of letters in database: 37,600,338
  Number of sequences in database:  30,099



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5