BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Eche_v2.0_cds.fasta 30,099 sequences; 37,600,338 total letters Query= AT1G79840_ATGL2_Athaliana Length=2331 Score E Sequences producing significant alignments: (Bits) Value Erche04g032940.1.mRNA1.mrna1gene=Erche04g032940.1.mRNA1 3482 0.0 >Erche04g032940.1.mRNA1.mrna1 gene=Erche04g032940.1.mRNA1 Length=2274 Score = 3482 bits (1885), Expect = 0.0 Identities = 2141/2265 (95%), Gaps = 15/2265 (1%) Strand=Plus/Plus Query 73 AGGGACAGGATTTGTATGTCAATGGCCGTCGACATGTCTTCCAAACAACCCACCAAAGAC 132 ||||| ||||||||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct 19 AGGGATTGGATTTGTATGTCAATGGCCGTCGAGATGTCATCGAAACAACCCACCAAAGAT 78 Query 133 TTTTTCTCCTCTCCAGCCCTCTCTCTATCTCTCGCTGGGATATTCCGGAATGCATCCTCC 192 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 79 TTTTTCTCCTCTCCAGCCCTCTCCCTCTCTCTCGCTGGGATATTCCGGAATGCATCCTCC 138 Query 193 GGCAGCACCAACC---CTGAGGAGGATTTCCTGGGCAGAAGAGTAGTTGACGATGAGGAT 249 ||||||||||||| ||||||||||||| ||| ||||||| |||||||||||||||||| Sbjct 139 GGCAGCACCAACCCTGCTGAGGAGGATTTTCTGAGCAGAAGGGTAGTTGACGATGAGGAT 198 Query 250 CGCACTGTGGAGATGAGCAGCGAGAACTCAGGACCCACGAGATCCAGATCAGAGGAGGAT 309 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 199 CGCACAGTGGAGATGAGCAGCGAGAACTCAGGACCCACGAGATCCAGATCAGAGGAGGAC 258 Query 310 TTGGAGGGTGAGGATCACGACGATGAGGAGGAGGAAGAGGAGGACGGCGCAGCTGGAAAC 369 |||||||||||||||||||| | |||||||||||||||||||| | | | |||||||| Sbjct 259 TTGGAGGGTGAGGATCACGA-G--GAGGAGGAGGAAGAGGAGGA-TG-GTA-CTGGAAAC 312 Query 370 AAGGGCACTAATAAGAGAAAGAGGAAGAAGTATCATCGTCACACCACCGATCAGATCAGA 429 ||||||| ||||||| || ||||||||||||||||| ||||||||||||||||||||| Sbjct 313 AAGGGCA---ATAAGAGGAAAAGGAAGAAGTATCATCGCCACACCACCGATCAGATCAGA 369 Query 430 CACATGGAAGCGCTATTCAAAGAGACACCACATCCGGACGAGAAGCAAAGACAGCAGCTG 489 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 370 CACATGGAAGCGCTATTCAAAGAGACACCACATCCGGACGAGAAGCAAAGACAACAGCTG 429 Query 490 AGCAAGCAACTAGGGCTGGCCCCTCGCCAGGTCAAGTTCTGGTTCCAAAACCGCCGCACA 549 |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct 430 AGCAAGCAACTAGGGCTGGCTCCTCGCCAAGTCAAGTTCTGGTTCCAAAACCGCCGCACC 489 Query 550 CAGATCAAGGCTATTCAAGAACGGCACGAGAACTCCCTGCTCAAGGCGGAACTAGAGAAG 609 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 490 CAGATCAAGGCTATTCAAGAACGGCACGAGAACTCGCTGCTGAAGGCGGAACTAGAGAAG 549 Query 610 CTGCGAGAGGAAAACAAAGCCATGAGGGAGTCTTTTTCCAAGGCTAATTCCTCCTGCCCC 669 |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||| Sbjct 550 CTGCGAGAGGAAAACAAAGCGATGAGAGAGTCGTTTTCCAAGGCTAATTCCTCCTGCCCC 609 Query 670 AACTGCGGAGGAGGCCCCGATGATCTCCACCTCGAAAACTCCAAACTGAAAGCCGAGCTC 729 ||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||| Sbjct 610 AACTGCGGAGGAGGCCCCGATGATCTCCACCTCGAAAACACCAAACTCAAAGCGGAGCTC 669 Query 730 GATAAGCTTCGTGCAGCTCTTGGACGCACTCCCTATCCCCTGCAGGCTTCATGCTCCGAC 789 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct 670 GATAAGCTTCGTGCAGCTCTCGGACGCACTCCCTATCCCCTGCAGGCTTCATGCACCGAC 729 Query 790 GATCAAGAACACCGTCTCGGCTCTCTCGATTTCTACACGGGCGTCTTTGCCCTCGAGAAG 849 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 730 GATCAAGAACACCGTCTCGGCTCTCTCGATTTCTACACGGGCGTCTTTGCCCTCGAGAAG 789 Query 850 TCCCGTATTGCCGAGATTTCTAACCGAGCCACCCTTGAACTCCAGAAGATGGCCACCTCA 909 ||||| || ||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct 790 TCCCGCATAGCCGAGATTGCCAACCGAGCCACCCTTGAACTCCAGAAGATGGCCACCTCC 849 Query 910 GGCGAACCTATGTGGCTCCGCAGCGTTGAGACTGGCCGTGAGATTCTCAACTACGATGAG 969 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 850 GGCGAACCTCTGTGGCTCCGCAGCGTTGAGACTGGCCGTGAGATTCTCAACTACGATGAG 909 Query 970 TACCTCAAGGAGTTTCCCCAAGCGCAAGCCTCTTCGTTTCCT---GGAAGGAAAACCATC 1026 |||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||| Sbjct 910 TACCTCAAGGAGTTCCCCCAAGCTCAAGCCTCTTCGTTTCCTGCAGGAAGGAAAACCATC 969 Query 1027 GAAGCATCTAGAGATGCGGGGATTGTGTTTATGGACGCACATAAACTTGCCCAGAGTTTC 1086 |||||||| ||||||| ||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 970 GAAGCATCCAGAGATGTGGGGATTGTGTTTATGGACGCACATAAACTTGCTCAGTGTTTC 1029 Query 1087 ATGGACGTGGGACAATGGAAAGAGACATTTGCATGCTTGATCTCAAAGGCTGCAACGGTC 1146 ||||||||||| ||||||||||||| ||||| ||||||||||||||||| || ||||| Sbjct 1030 ATGGACGTGGGGCAATGGAAAGAGATGTTTGCGTGCTTGATCTCAAAGGCGGCGACGGTT 1089 Query 1147 GATGTTATCCGGCAAGGCGAAGGGCCTTCACGGATCGACGGGGCTATTCAGCTGATGTTC 1206 ||||| ||||| ||||| ||||||||||||||||| ||||| ||||||||| |||||||| Sbjct 1090 GATGTAATCCGTCAAGGTGAAGGGCCTTCACGGATTGACGGTGCTATTCAGTTGATGTTC 1149 Query 1207 GGAGAGATGCAGCTGCTCACTCCGGTCGTCCCCACAAGAGAAGTGTACTTCGTGAGAAGC 1266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1150 GGGGAGATGCAGCTGCTCACTCCGGTCGTCCCCACAAGAGAAGTGTACTTCGTGAGAAGC 1209 Query 1267 TGCCGGCAGCTGAGCCCTGAGAAATGGGCAATAGTGGACGTCTCGGTCTCCGTGGAGGAC 1326 |||||||||||||||||||| |||||||| || ||||||||||||||||| ||||||||| Sbjct 1210 TGCCGGCAGCTGAGCCCTGACAAATGGGCTATTGTGGACGTCTCGGTCTCTGTGGAGGAC 1269 Query 1327 AGCAACACGGAGAAGGAGGCTTCTCTTCTGAAATGTCGAAAACTCCCCTCCGGTTGCATC 1386 |||||||| |||||||||||||| |||||||||||||| ||||| ||||| || |||||| Sbjct 1270 AGCAACACAGAGAAGGAGGCTTCCCTTCTGAAATGTCGGAAACTACCCTCGGGGTGCATC 1329 Query 1387 ATCGAGGACACCTCCAACGGTCACTCCAAGGTCACCTGGGTGGAGCACCTCGACGTGTCT 1446 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1330 ATCGAGGACACCTCCAACGGCCACTCCAAGGTCACCTGGGTGGAGCACCTCGACGTGTCT 1389 Query 1447 GCATCCACAGTTCAGCCTCTCTTCCGCTCCTTAGTCAACACCGGTTTGGCCTTTGGGGCT 1506 || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1390 GCCTCCACGATTCAGCCTCTCTTCCGCTCCTTAGTCAACACCGGTTTGGCCTTTGGGGCT 1449 Query 1507 CGACACTGGGTCGCCACCCTTCAGCTCCATTGCGAACGCCTTGTCTTCTTCATGGCTACC 1566 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1450 CGACACTGGGTCGCCACCCTTCAGCTCCACTGCGAACGCCTTGTCTTCTTCATGGCTACC 1509 Query 1567 AACGTCCCCACCAAAGACTCTCTCGGAGTTACAACTCTTGCCGGGAGAAAGAGTGTGCTG 1626 |||||||||||||| |||||||||||||||||||| || |||||||||||||| |||||| Sbjct 1510 AACGTCCCCACCAAGGACTCTCTCGGAGTTACAACGCTGGCCGGGAGAAAGAGCGTGCTG 1569 Query 1627 AAGATGGCTCAGAGAATGACACAAAGCTTCTACCGCGCCATTGCTGCATCAAGCTACCAT 1686 |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1570 AAGATGGCGCAGAGGATGACACAAAGCTTCTACCGCGCCATTGCTGCATCAAGCTACCAC 1629 Query 1687 CAATGGACCAAAATCACCACCAAAACTGGACAAGACATGCGGGTTTCTTCCAGGAAGAAC 1746 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1630 CAATGGACCAAAATCACAACCAAAACTGGACAAGACATGCGGGTTTCTTCCAGGAAGAAC 1689 Query 1747 CTTCATGATCCTGGCGAGCCCACGGGAGTCATTGTCTGCGCTTCTTCTTCGCTGTGGTTA 1806 ||||||||||||||||||||||| ||||| |||||||||||||||||||| || |||||| Sbjct 1690 CTTCATGATCCTGGCGAGCCCACTGGAGTTATTGTCTGCGCTTCTTCTTCCCTCTGGTTA 1749 Query 1807 CCTGTTTCTCCAGCTCTTCTCTTCGATTTCTTTAGAGATGAAGCTCGTCGGCATGAGTGG 1866 ||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1750 CCTGTTTCTCCCACTATTCTCTTCGATTTCTTTAGAGATGAAGCTCGTCGCCATGAGTGG 1809 Query 1867 GATGCTTTGTCAAACGGAGCTCATGTTCAGTCTATTGCAAACTTATCCAAGGGACAAGAC 1926 |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct 1810 GATGCTTTGTCAAACGGAGCGCATGTTCAGTCTATTGCAAGCTTATCCAAGGGACAAGAC 1869 Query 1927 AGAGGCAACTCAGTGGCAATCCAGACAGTGAAATCGAGAGAAAAGAGCATATGGGTGCTG 1986 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1870 AGAGGCAACTCAGTGGCTATCCAGACAGTGAAATCGAGAGAAAAGAGCATATGGGTGCTG 1929 Query 1987 CAAGACAGCAGCACTAACTCGTATGAGTCGGTGGTGGTATACGCTCCCGTAGATATAAAC 2046 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1930 CAAGACAGCTGCACTAACTCGTATGAGTCGGTGGTGGTATACGCTCCTGTAGATATAAAC 1989 Query 2047 ACGACACAGCTGGTGCTCGCGGGACATGATCCAAGCAACATCCAAATCCTCCCCTCTGGA 2106 ||||||||||| || || |||||||||||||||||||||||||||||||| ||||||||| Sbjct 1990 ACGACACAGCTAGTACTTGCGGGACATGATCCAAGCAACATCCAAATCCTGCCCTCTGGA 2049 Query 2107 TTCTCAATCATACCTGATGGAGTAGAGTCACGGCCACTGGTAATAACGTCTACACAAGAC 2166 |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 2050 TTCTCAATCATACCCGATGGGGTAGAGTCACGGCCACTGGTAATCACGTCTACACAAGAC 2109 Query 2167 GACAGAAACAGCCAAGGAGGGTCGCTCCTGACACTCGCCCTCCAAACCCTCATCAACCCT 2226 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 2110 GACAGAAACAGCCAAGGAGGGTCTCTCCTCACACTCGCCCTCCAAACCCTCATCAACCCT 2169 Query 2227 TCTCCTGCAGCAAAGCTGAATATGGAGTCTGTGGAATCCGTGACAAACCTCGTCTCAGTC 2286 |||||||||||||| |||||||||||||||||||||||||| |||||||||||||| || Sbjct 2170 TCTCCTGCAGCAAAACTGAATATGGAGTCTGTGGAATCCGTCACAAACCTCGTCTCTGTG 2229 Query 2287 ACACTACACAACATTAAGAGAAGTCTACAAATCGAAGATTGCTGA 2331 || |||||||||||||||||||| ||||||||||||||||||||| Sbjct 2230 ACGCTACACAACATTAAGAGAAGCCTACAAATCGAAGATTGCTGA 2274 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 84864946020 Database: Eche_v2.0_cds.fasta Posted date: Jul 17, 2024 4:51 PM Number of letters in database: 37,600,338 Number of sequences in database: 30,099 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5