BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Eche_v2.0_cds.fasta 30,099 sequences; 37,600,338 total letters Query= Untitled_sequence Length=20 Score E Sequences producing significant alignments: (Bits) Value Erche07g009500.1.mRNA1.mrna1gene=Erche07g009500.1.mRNA1 38.1 4e-04 Erche07g009480.1.mRNA1.mrna1gene=Erche07g009480.1.mRNA1 38.1 4e-04 Erche03g032390.1.mRNA1.mrna1gene=Erche03g032390.1.mRNA1 38.1 4e-04 Erche08g020250.1.mRNA1.mrna1gene=Erche08g020250.1.mRNA1 32.5 0.018 Erche04g002730.1.mRNA1.mrna1gene=Erche04g002730.1.mRNA1 28.8 0.23 Erche04g002870.1.mRNA1.mrna1gene=Erche04g002870.1.mRNA1 28.8 0.23 Erche03g029150.1.mRNA1.mrna1gene=Erche03g029150.1.mRNA1 28.8 0.23 Erche01g035760.1.mRNA1.mrna1gene=Erche01g035760.1.mRNA1 28.8 0.23 Erche01g035780.1.mRNA1.mrna1gene=Erche01g035780.1.mRNA1 28.8 0.23 Erche01g035910.1.mRNA1.mrna1gene=Erche01g035910.1.mRNA1 28.8 0.23 Erche04g032750.1.mRNA1.mrna1gene=Erche04g032750.1.mRNA1 27.0 0.84 >Erche07g009500.1.mRNA1.mrna1 gene=Erche07g009500.1.mRNA1 Length=1488 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 CGCCTTATTGCACAAGGAAA 20 |||||||||||||||||||| Sbjct 777 CGCCTTATTGCACAAGGAAA 758 >Erche07g009480.1.mRNA1.mrna1 gene=Erche07g009480.1.mRNA1 Length=8238 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 CGCCTTATTGCACAAGGAAA 20 |||||||||||||||||||| Sbjct 696 CGCCTTATTGCACAAGGAAA 677 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 CGCCTTATTGCACAAGGAAA 20 |||||||||||||||||||| Sbjct 7563 CGCCTTATTGCACAAGGAAA 7544 Score = 30.7 bits (16), Expect = 0.065 Identities = 18/19 (95%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 GCCTTATTGCACAAGGAAA 20 ||||| ||||||||||||| Sbjct 3503 GCCTTGTTGCACAAGGAAA 3485 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 3 CCTTATTGCACAAGGAAA 20 |||| ||||||||||||| Sbjct 2035 CCTTGTTGCACAAGGAAA 2018 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 3 CCTTATTGCACAAGGAAA 20 |||| ||||||||||||| Sbjct 5125 CCTTGTTGCACAAGGAAA 5108 >Erche03g032390.1.mRNA1.mrna1 gene=Erche03g032390.1.mRNA1 Length=2571 Score = 38.1 bits (20), Expect = 4e-04 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 CGCCTTATTGCACAAGGAAA 20 |||||||||||||||||||| Sbjct 780 CGCCTTATTGCACAAGGAAA 761 >Erche08g020250.1.mRNA1.mrna1 gene=Erche08g020250.1.mRNA1 Length=2991 Score = 32.5 bits (17), Expect = 0.018 Identities = 17/17 (100%), Gaps = 0/17 (0%) Strand=Plus/Minus Query 4 CTTATTGCACAAGGAAA 20 ||||||||||||||||| Sbjct 2352 CTTATTGCACAAGGAAA 2336 >Erche04g002730.1.mRNA1.mrna1 gene=Erche04g002730.1.mRNA1 Length=6414 Score = 28.8 bits (15), Expect = 0.23 Identities = 15/15 (100%), Gaps = 0/15 (0%) Strand=Plus/Plus Query 6 TATTGCACAAGGAAA 20 ||||||||||||||| Sbjct 3866 TATTGCACAAGGAAA 3880 >Erche04g002870.1.mRNA1.mrna1 gene=Erche04g002870.1.mRNA1 Length=5845 Score = 28.8 bits (15), Expect = 0.23 Identities = 15/15 (100%), Gaps = 0/15 (0%) Strand=Plus/Plus Query 6 TATTGCACAAGGAAA 20 ||||||||||||||| Sbjct 926 TATTGCACAAGGAAA 940 >Erche03g029150.1.mRNA1.mrna1 gene=Erche03g029150.1.mRNA1 Length=2616 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 3 CCTTATTGCACAAGGAAA 20 |||| ||||||||||||| Sbjct 1141 CCTTGTTGCACAAGGAAA 1124 >Erche01g035760.1.mRNA1.mrna1 gene=Erche01g035760.1.mRNA1 Length=6111 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 3 CCTTATTGCACAAGGAAA 20 |||| ||||||||||||| Sbjct 670 CCTTGTTGCACAAGGAAA 653 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 3 CCTTATTGCACAAGGAAA 20 |||| ||||||||||||| Sbjct 2197 CCTTGTTGCACAAGGAAA 2180 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 3 CCTTATTGCACAAGGAAA 20 |||| ||||||||||||| Sbjct 3451 CCTTGTTGCACAAGGAAA 3434 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 3 CCTTATTGCACAAGGAAA 20 |||| ||||||||||||| Sbjct 4723 CCTTGTTGCACAAGGAAA 4706 >Erche01g035780.1.mRNA1.mrna1 gene=Erche01g035780.1.mRNA1 Length=789 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 3 CCTTATTGCACAAGGAAA 20 |||| ||||||||||||| Sbjct 253 CCTTGTTGCACAAGGAAA 236 >Erche01g035910.1.mRNA1.mrna1 gene=Erche01g035910.1.mRNA1 Length=2535 Score = 28.8 bits (15), Expect = 0.23 Identities = 17/18 (94%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 3 CCTTATTGCACAAGGAAA 20 |||| ||||||||||||| Sbjct 694 CCTTGTTGCACAAGGAAA 677 >Erche04g032750.1.mRNA1.mrna1 gene=Erche04g032750.1.mRNA1 Length=4071 Score = 27.0 bits (14), Expect = 0.84 Identities = 14/14 (100%), Gaps = 0/14 (0%) Strand=Plus/Minus Query 7 ATTGCACAAGGAAA 20 |||||||||||||| Sbjct 1943 ATTGCACAAGGAAA 1930 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 111265965 Database: Eche_v2.0_cds.fasta Posted date: Jul 17, 2024 4:51 PM Number of letters in database: 37,600,338 Number of sequences in database: 30,099 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5