BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Eche_v2.0_cds.fasta
           30,099 sequences; 37,600,338 total letters



Query= Untitled_sequence

Length=20
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Erche06g030400.1.mRNA1.mrna1gene=Erche06g030400.1.mRNA1               38.1    4e-04
Erche08g020260.1.mRNA1.mrna1gene=Erche08g020260.1.mRNA1               27.0    0.84 
Erche08g013559.1.mRNA1.mrna1gene=Erche08g013559.1.mRNA1               27.0    0.84 
Erche08g013460.1.mRNA1.mrna1gene=Erche08g013460.1.mRNA1               27.0    0.84 
Erche06g006110.1.mRNA1.mrna1gene=Erche06g006110.1.mRNA1               27.0    0.84 
Erche05g001770.1.mRNA1.mrna1gene=Erche05g001770.1.mRNA1               27.0    0.84 
Erche04g002700.1.mRNA1.mrna1gene=Erche04g002700.1.mRNA1               27.0    0.84 
Erche03g016260.1.mRNA1.mrna1gene=Erche03g016260.1.mRNA1               27.0    0.84 
Erche02g040970.1.mRNA1.mrna1gene=Erche02g040970.1.mRNA1               27.0    0.84 
Erche02g027330.1.mRNA1.mrna1gene=Erche02g027330.1.mRNA1               27.0    0.84 
Erche02g010510.1.mRNA1.mrna1gene=Erche02g010510.1.mRNA1               27.0    0.84 
Erche01g010350.1.mRNA1.mrna1gene=Erche01g010350.1.mRNA1               27.0    0.84 
Erche01g042050.1.mRNA1.mrna1gene=Erche01g042050.1.mRNA1               27.0    0.84 


>Erche06g030400.1.mRNA1.mrna1 gene=Erche06g030400.1.mRNA1
Length=2955

 Score = 38.1 bits (20),  Expect = 4e-04
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  1     AGCCTTTTGTCTTCAAGTAT  20
             ||||||||||||||||||||
Sbjct  1367  AGCCTTTTGTCTTCAAGTAT  1348


>Erche08g020260.1.mRNA1.mrna1 gene=Erche08g020260.1.mRNA1
Length=2505

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  4    CTTTTGTCTTCAAG  17
            ||||||||||||||
Sbjct  752  CTTTTGTCTTCAAG  739


>Erche08g013559.1.mRNA1.mrna1 gene=Erche08g013559.1.mRNA1
Length=1185

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  6     TTTGTCTTCAAGTA  19
             ||||||||||||||
Sbjct  1181  TTTGTCTTCAAGTA  1168


>Erche08g013460.1.mRNA1.mrna1 gene=Erche08g013460.1.mRNA1
Length=1185

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  6     TTTGTCTTCAAGTA  19
             ||||||||||||||
Sbjct  1181  TTTGTCTTCAAGTA  1168


>Erche06g006110.1.mRNA1.mrna1 gene=Erche06g006110.1.mRNA1
Length=3042

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 16/17 (94%), Gaps = 0/17 (0%)
 Strand=Plus/Minus

Query  3    CCTTTTGTCTTCAAGTA  19
            ||||||| |||||||||
Sbjct  959  CCTTTTGACTTCAAGTA  943


>Erche05g001770.1.mRNA1.mrna1 gene=Erche05g001770.1.mRNA1
Length=1746

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  2    GCCTTTTGTCTTCA  15
            ||||||||||||||
Sbjct  291  GCCTTTTGTCTTCA  304


>Erche04g002700.1.mRNA1.mrna1 gene=Erche04g002700.1.mRNA1
Length=1347

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  4    CTTTTGTCTTCAAG  17
            ||||||||||||||
Sbjct  521  CTTTTGTCTTCAAG  508


>Erche03g016260.1.mRNA1.mrna1 gene=Erche03g016260.1.mRNA1
Length=1599

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  2    GCCTTTTGTCTTCA  15
            ||||||||||||||
Sbjct  147  GCCTTTTGTCTTCA  160


>Erche02g040970.1.mRNA1.mrna1 gene=Erche02g040970.1.mRNA1
Length=1497

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  4    CTTTTGTCTTCAAG  17
            ||||||||||||||
Sbjct  833  CTTTTGTCTTCAAG  820


>Erche02g027330.1.mRNA1.mrna1 gene=Erche02g027330.1.mRNA1
Length=1689

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  4    CTTTTGTCTTCAAG  17
            ||||||||||||||
Sbjct  455  CTTTTGTCTTCAAG  442


>Erche02g010510.1.mRNA1.mrna1 gene=Erche02g010510.1.mRNA1
Length=2112

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  4    CTTTTGTCTTCAAG  17
            ||||||||||||||
Sbjct  602  CTTTTGTCTTCAAG  589


>Erche01g010350.1.mRNA1.mrna1 gene=Erche01g010350.1.mRNA1
Length=1497

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  7    TTGTCTTCAAGTAT  20
            ||||||||||||||
Sbjct  961  TTGTCTTCAAGTAT  948


>Erche01g042050.1.mRNA1.mrna1 gene=Erche01g042050.1.mRNA1
Length=1788

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  7    TTGTCTTCAAGTAT  20
            ||||||||||||||
Sbjct  958  TTGTCTTCAAGTAT  945



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 111265965


  Database: Eche_v2.0_cds.fasta
    Posted date:  Jul 17, 2024  4:51 PM
  Number of letters in database: 37,600,338
  Number of sequences in database:  30,099



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5