BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Eche_v2.0_cds.fasta
           30,099 sequences; 37,600,338 total letters



Query= Untitled_sequence

Length=1735
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Erche04g030750.1.mRNA1.mrna1gene=Erche04g030750.1.mRNA1               224     2e-57
Erche04g030770.1.mRNA1.mrna1gene=Erche04g030770.1.mRNA1               174     2e-42


>Erche04g030750.1.mRNA1.mrna1 gene=Erche04g030750.1.mRNA1
Length=1230

 Score = 224 bits (121),  Expect = 2e-57
 Identities = 121/121 (100%), Gaps = 0/121 (0%)
 Strand=Plus/Minus

Query  250  ACCGGAGAGAGTTTCCTCGAAGCATCTGGATTTGTCGTGGTGAGAGGTGAAGACATGAAC  309
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  180  ACCGGAGAGAGTTTCCTCGAAGCATCTGGATTTGTCGTGGTGAGAGGTGAAGACATGAAC  121

Query  310  GTTATGACCGTGCGACGCAAGCTCAACCGCCGCATCGACGATCAATCTCTCTGCTCCACC  369
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  120  GTTATGACCGTGCGACGCAAGCTCAACCGCCGCATCGACGATCAATCTCTCTGCTCCACC  61

Query  370  T  370
            |
Sbjct  60   T  60


 Score = 117 bits (63),  Expect = 3e-25
 Identities = 63/63 (100%), Gaps = 0/63 (0%)
 Strand=Plus/Minus

Query  625  ACCTATTCCAAGATCTGGATGTATAATGGCGATGTTCATCTTTGAATCTTCTTTATTCCC  684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  63   ACCTATTCCAAGATCTGGATGTATAATGGCGATGTTCATCTTTGAATCTTCTTTATTCCC  4

Query  685  CAT  687
            |||
Sbjct  3    CAT  1


 Score = 102 bits (55),  Expect = 8e-21
 Identities = 62/65 (95%), Gaps = 1/65 (2%)
 Strand=Plus/Minus

Query  1    GGTAGAGAATATGGCGTGGCAAGAAAGAACCATACACAGTAACTTGAAAGATACCTG-GA  59
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct  232  GGTAGAGAATATGGCGTGGCAAGAAAGAACCATACACAGTAACTTGAAAGATACCGGAGA  173

Query  60   TAGTT  64
             ||||
Sbjct  172  GAGTT  168


>Erche04g030770.1.mRNA1.mrna1 gene=Erche04g030770.1.mRNA1
Length=1431

 Score = 174 bits (94),  Expect = 2e-42
 Identities = 96/97 (99%), Gaps = 0/97 (0%)
 Strand=Plus/Minus

Query  1639  CCTCAATCACGGATGATGGCTTCTCATTGTTTTGGTTCGCATTAGATTCAACACGAGAAT  1698
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1375  CCTCAATCACGGATGATGGCTTCTCATTGTTTTGGTTCGCATTAGATTCAACACGAGAAT  1316

Query  1699  CATCGCCTTTCATTACTCTACGTGGAAGACGATCAAA  1735
             |||||||| ||||||||||||||||||||||||||||
Sbjct  1315  CATCGCCTATCATTACTCTACGTGGAAGACGATCAAA  1279


 Score = 110 bits (59),  Expect = 5e-23
 Identities = 61/62 (98%), Gaps = 0/62 (0%)
 Strand=Plus/Minus

Query  1506  AACGCATGCCTCATTGTTGACCTGTGGATTATCAGCTTTATCTTCGCACATATGTTCCTG  1565
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct  1431  AACGCATGCCTCATTGTTGACCTGTGGATTATCAGCTTTATCTTCGCACATATGTTCCTC  1372

Query  1566  AA  1567
             ||
Sbjct  1371  AA  1370



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 62921558676


  Database: Eche_v2.0_cds.fasta
    Posted date:  Jul 17, 2024  4:51 PM
  Number of letters in database: 37,600,338
  Number of sequences in database:  30,099



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5