BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Eche_v2.0_cds.fasta
           30,099 sequences; 37,600,338 total letters



Query= Untitled_sequence

Length=20
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Erche06g002390.1.mRNA1.mrna1gene=Erche06g002390.1.mRNA1               36.2    0.001
Erche06g008220.1.mRNA1.mrna1gene=Erche06g008220.1.mRNA1               32.5    0.018
Erche06g008760.1.mRNA1.mrna1gene=Erche06g008760.1.mRNA1               30.7    0.065
Erche01g023700.1.mRNA1.mrna1gene=Erche01g023700.1.mRNA1               30.7    0.065
Erche08g016005.1.mRNA1.mrna1gene=Erche08g016005.1.mRNA1               28.8    0.23 
Erche08g016000.1.mRNA1.mrna1gene=Erche08g016000.1.mRNA1               28.8    0.23 
Erche04g026280.1.mRNA1.mrna1gene=Erche04g026280.1.mRNA1               28.8    0.23 
Erche03g023340.1.mRNA1.mrna1gene=Erche03g023340.1.mRNA1               28.8    0.23 
Erche04g019500.1.mRNA1.mrna1gene=Erche04g019500.1.mRNA1               27.0    0.84 
Erche03g015530.1.mRNA1.mrna1gene=Erche03g015530.1.mRNA1               27.0    0.84 
Erche03g017700.1.mRNA1.mrna1gene=Erche03g017700.1.mRNA1               27.0    0.84 


>Erche06g002390.1.mRNA1.mrna1 gene=Erche06g002390.1.mRNA1
Length=957

 Score = 36.2 bits (19),  Expect = 0.001
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  2    AAGAGTTGTAGATTGCGAT  20
            |||||||||||||||||||
Sbjct  151  AAGAGTTGTAGATTGCGAT  169


>Erche06g008220.1.mRNA1.mrna1 gene=Erche06g008220.1.mRNA1
Length=1197

 Score = 32.5 bits (17),  Expect = 0.018
 Identities = 19/20 (95%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1    AAAGAGTTGTAGATTGCGAT  20
            ||||||||||||| ||||||
Sbjct  150  AAAGAGTTGTAGACTGCGAT  169


>Erche06g008760.1.mRNA1.mrna1 gene=Erche06g008760.1.mRNA1
Length=870

 Score = 30.7 bits (16),  Expect = 0.065
 Identities = 18/19 (95%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  2    AAGAGTTGTAGATTGCGAT  20
            ||||||||||||||| |||
Sbjct  151  AAGAGTTGTAGATTGAGAT  169


>Erche01g023700.1.mRNA1.mrna1 gene=Erche01g023700.1.mRNA1
Length=723

 Score = 30.7 bits (16),  Expect = 0.065
 Identities = 18/19 (95%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  2    AAGAGTTGTAGATTGCGAT  20
            ||||||||||||||| |||
Sbjct  151  AAGAGTTGTAGATTGAGAT  169


>Erche08g016005.1.mRNA1.mrna1 gene=Erche08g016005.1.mRNA1
Length=666

 Score = 28.8 bits (15),  Expect = 0.23
 Identities = 15/15 (100%), Gaps = 0/15 (0%)
 Strand=Plus/Plus

Query  1    AAAGAGTTGTAGATT  15
            |||||||||||||||
Sbjct  168  AAAGAGTTGTAGATT  182


>Erche08g016000.1.mRNA1.mrna1 gene=Erche08g016000.1.mRNA1
Length=762

 Score = 28.8 bits (15),  Expect = 0.23
 Identities = 15/15 (100%), Gaps = 0/15 (0%)
 Strand=Plus/Plus

Query  1    AAAGAGTTGTAGATT  15
            |||||||||||||||
Sbjct  168  AAAGAGTTGTAGATT  182


>Erche04g026280.1.mRNA1.mrna1 gene=Erche04g026280.1.mRNA1
Length=825

 Score = 28.8 bits (15),  Expect = 0.23
 Identities = 15/15 (100%), Gaps = 0/15 (0%)
 Strand=Plus/Plus

Query  1    AAAGAGTTGTAGATT  15
            |||||||||||||||
Sbjct  150  AAAGAGTTGTAGATT  164


>Erche03g023340.1.mRNA1.mrna1 gene=Erche03g023340.1.mRNA1
Length=921

 Score = 28.8 bits (15),  Expect = 0.23
 Identities = 15/15 (100%), Gaps = 0/15 (0%)
 Strand=Plus/Plus

Query  2    AAGAGTTGTAGATTG  16
            |||||||||||||||
Sbjct  154  AAGAGTTGTAGATTG  168


>Erche04g019500.1.mRNA1.mrna1 gene=Erche04g019500.1.mRNA1
Length=882

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 18/20 (90%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1    AAAGAGTTGTAGATTGCGAT  20
            ||| |||||||||||| |||
Sbjct  171  AAAAAGTTGTAGATTGAGAT  190


>Erche03g015530.1.mRNA1.mrna1 gene=Erche03g015530.1.mRNA1
Length=624

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 18/20 (90%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1    AAAGAGTTGTAGATTGCGAT  20
            |||||| ||||||||| |||
Sbjct  174  AAAGAGCTGTAGATTGAGAT  193


>Erche03g017700.1.mRNA1.mrna1 gene=Erche03g017700.1.mRNA1
Length=1023

 Score = 27.0 bits (14),  Expect = 0.84
 Identities = 18/20 (90%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1    AAAGAGTTGTAGATTGCGAT  20
            ||| |||||||||||| |||
Sbjct  150  AAAAAGTTGTAGATTGAGAT  169



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 111265965


  Database: Eche_v2.0_cds.fasta
    Posted date:  Jul 17, 2024  4:51 PM
  Number of letters in database: 37,600,338
  Number of sequences in database:  30,099



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5